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Report for CCDS12514.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12514.2 Public Homo sapiens 19 CATSPERG 24 110 108 CCDS HistoryNCBI Gene:57828Re-query CCDS DB by CCDS ID:12514.2Re-query CCDS DB by GeneID:57828See the combined annotation on chromosome 19 in Sequence Viewer

Public Note for CCDS 12514.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and homology data. The update adds a predicted signal peptide to the protein.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 12514.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409235.8 ENSP00000386962.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409235.8Link to Ensembl Protein Viewer:ENSP00000386962.3Re-query CCDS DB by Nucleotide ID:ENST00000409235Re-query CCDS DB by Protein ID:ENSP00000386962
Original member Current member NCBI NM_021185.5 NP_067008.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021185.5Link to Protein Sequence:NP_067008.3Re-query CCDS DB by Nucleotide ID:NM_021185Re-query CCDS DB by Protein ID:NP_067008Link to BLAST:NP_067008.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067008.3 1159 Q6ZRH7 1159 100% 0 0

Chromosomal Locations for CCDS 12514.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38337235 38337504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38337593 38337646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38343580 38343724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38343993 38344119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38344296 38344368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38346450 38346605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38352261 38352432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38354710 38354847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38356484 38356543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38356742 38356861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38358278 38358328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38358432 38358561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38359470 38359581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38360489 38360647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38360731 38360843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38361648 38361861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38362210 38362272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38362376 38362574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38362714 38362832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38364891 38364971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38365061 38365117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38367156 38367312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38367509 38367572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38367681 38367776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38368048 38368137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38369972 38370064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38370159 38370258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38370526 38370792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3480 nt):
ATGTGCGGCCCAGCCATGTTCCCTGCCGGTCCTCCGTGGCCCAGAGTCCGAGTCGTGCAGGTGCTGTGGG
CCCTGCTGGCAGTGCTCCTGGCGTCGTGGAGGCTGTGGGCGATCAAGGATTTCCAGGAATGCACCTGGCA
GGTTGTCCTGAACGAGTTTAAGAGGGTAGGCGAGAGTGGTGTGAGCGACAGCTTCTTTGAGCAAGAGCCC
GTGGACACAGTGAGCAGCTTGTTTCACATGCTGGTGGACTCACCCATCGACCCGAGCGAGAAATACCTGG
GCTTCCCTTACTACCTGAAGATCAACTACTCCTGCGAGGAAAAGCCCTCTGAGGACCTGGTGCGCATGGG
CCACCTGACGGGGCTAAAGCCCCTGGTGCTGGTCACCTTCCAGTCCCCAGTCAACTTCTACCGCTGGAAG
ATAGAGCAGCTGCAGATCCAGATGGAGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAAG
TGTGTAGCATGAGCTGGTACACGCCCATGCCCATCAAGAAAGGCAGTGTGGTCATGCGTGTGGACATCAG
CAGCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGAGA
GACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGG
GTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCCCAA
TGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGTGGAGCTGAGCATTGACAGT
TGCTGGGTGGGCTCCTTCTACTGCCCCCATTCTGGCTTCACAGCCACCATCTATGACACTATTGCCACCG
AGAGCACCCTCTTCATTCGGCAGAACCAGCTGGTCTACTATTTTACAGGCACCTATACCACACTCTATGA
GAGAAACCGCGGCAGTGGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTG
TATTTCCATAGCAATGGCTCTGAGTACATAATGGCCCTCACCACGGGCAAGCATGAGGGTTATGTACACT
TCGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGAT
AGGAGTTACCACCTGCTCCATAATTTGGTCTGAATACATCGCGGGTGAGTATACTCTACTGCTGCTGGTG
GAGAGTGGATATGGTAATGCAAGTAAACGTTTCCAGGTGGTCAGCTACAACACAGCTAGTGATGACCTGG
AACTTCTCTACCACATCCCAGAATTCATCCCTGAAGCTCGAGGATTGGAGTTCCTGATGATCCTAGGGAC
AGAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATCTGATCTTC
ATCTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTACCTGGCAGACTTCCCCAAGG
AACTGTCCATCAAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATTGTCACAGAGACGGAGGAGAT
CTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCAAGGGCTGGCAGGTGCACATC
AGCTTAAAGCTGATGCAACAGTCCTCTCTCTACGCATCCAATGAGACCATGCTGACCCTCTTCTACGAAG
ACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCAGCTGGTCAAGAGGCTCGTGCC
CGTGGAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGGAGCGGAAAGGGGGCTACTTG
ATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAGCCTGCCCAGTCCGCAGAGAT
ACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGCTCGGGCTTCCACAACGAGAA
CTCGCTCGCCATCTACCAGGGCCTGGTCTACTACCTGCTGTGGCTGCACTCCGTGTACGACAAGCCGTAC
GCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACAAGACCAGGATTACTACTTCT
TCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGACAGCTACGAAAAGATCTACAA
CCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCACTGAGTACAGCTTCGCCATC
TTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCACCGCCTTCCAGCTGCATAGCC
AGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCGGTGAAGCAGGAGGTCCTGAT
TAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCTTTGCTATGACCAAGGCATTAGT
GGACATCACCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATCCGGGCTCTGCTTCCAGGAAA
CACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATTGGCTGCCCCCCAGGCAAGCG
CCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAACAAACACTACTTTGACTGCGTT
AACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCCCTTCTTCTTGATTCAAGATT
TGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTGGTGGGTGGCGGGCCCACACT
GGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCCCCCTGGACAAGACCAACAGC
CTTATCTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCACATCATGTCCCACGAGAGCC
CAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATGTTCCCCAAGGCATCTTTGCCCC
TGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCACCTACTGCAACTACCAGCTC
ACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCTTTTCATCATCATGGTGTCAG
CTAGCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTGTGGCCCCTCGTGGTGAAGGG
CTGCACGATGATCCGGTGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACACCTACGCCTCCATT
TCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGGGCTCCATGTTCAGCTCCAGGATGACAG
AGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGA

Translation (1159 aa):
MCGPAMFPAGPPWPRVRVVQVLWALLAVLLASWRLWAIKDFQECTWQVVLNEFKRVGESGVSDSFFEQEP
VDTVSSLFHMLVDSPIDPSEKYLGFPYYLKINYSCEEKPSEDLVRMGHLTGLKPLVLVTFQSPVNFYRWK
IEQLQIQMEAAPFRSKEPCMAEEVCSMSWYTPMPIKKGSVVMRVDISSNGLGTFIPDKRFQMNINGFLKR
DRDNNIQFTVGEELFNLMPQYFVGVSSRPLWHTVDQSPVLILGGIPNEKYVLMTDTSFKDFSLVELSIDS
CWVGSFYCPHSGFTATIYDTIATESTLFIRQNQLVYYFTGTYTTLYERNRGSGSWIRVLASECIKKLCPV
YFHSNGSEYIMALTTGKHEGYVHFGTIRDGQVSFEMLPRQWSVCEQIGVTTCSIIWSEYIAGEYTLLLLV
ESGYGNASKRFQVVSYNTASDDLELLYHIPEFIPEARGLEFLMILGTESYTSTAMAPKGIFCNPYNNLIF
IWGNFLLQSSNKENFIYLADFPKELSIKYMARSFRGAVAIVTETEEIWYLLEGSYRVYQLFPSKGWQVHI
SLKLMQQSSLYASNETMLTLFYEDSKLYQLVYLMNNQKGQLVKRLVPVEQLLMYQQHTSHYDLERKGGYL
MLSFIDFCPFSVMRLRSLPSPQRYTRQERYRARPPRVLERSGFHNENSLAIYQGLVYYLLWLHSVYDKPY
ADPVHDPTWRWWANNKQDQDYYFFLASNWRSAGGVSIEMDSYEKIYNLESAYELPERIFLDKGTEYSFAI
FLSAQGHSFRTQSELGTAFQLHSQVDVGVVLADPGCIEASVKQEVLINRNSVLFSITLKDKKLCYDQGIS
GHHLMETSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFIGCPPGKRLAFDITYTLEYSRLKNKHYFDCV
NVNPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLVVGGGPTLDSLKDYSEDEIYRFNSPLDKTNS
LIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNVPQGIFAPEFFFKVLVSNRGVDTSTYCNYQL
TFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTMIRWKINNLIASESYYTYASI
SGISSMPSLRHSRMGSMFSSRMTEDRAEPKEAVERQLMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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