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Report for CCDS4070.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4070.1 Public Homo sapiens 5 KIAA0825 24 110 108 CCDS HistoryNCBI Gene:285600Re-query CCDS DB by CCDS ID:4070.1Re-query CCDS DB by GeneID:285600See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4070.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329378.7 ENSP00000331385.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000329378.7Link to Ensembl Protein Viewer:ENSP00000331385.6Re-query CCDS DB by Nucleotide ID:ENST00000329378Re-query CCDS DB by Protein ID:ENSP00000331385
Original member Current member NCBI NM_001385715.1 NP_001372644.1 Accepted alive Link to Nucleotide Sequence:NM_001385715.1Link to Protein Sequence:NP_001372644.1Re-query CCDS DB by Nucleotide ID:NM_001385715Re-query CCDS DB by Protein ID:NP_001372644Link to BLAST:NP_001372644.1
Original member Current member NCBI NM_001385716.1 NP_001372645.1 Accepted alive Link to Nucleotide Sequence:NM_001385716.1Link to Protein Sequence:NP_001372645.1Re-query CCDS DB by Nucleotide ID:NM_001385716Re-query CCDS DB by Protein ID:NP_001372645Link to BLAST:NP_001372645.1
Original member Current member NCBI NM_001385717.1 NP_001372646.1 Accepted alive Link to Nucleotide Sequence:NM_001385717.1Link to Protein Sequence:NP_001372646.1Re-query CCDS DB by Nucleotide ID:NM_001385717Re-query CCDS DB by Protein ID:NP_001372646Link to BLAST:NP_001372646.1
Original member Current member NCBI NM_001385719.1 NP_001372648.1 Accepted alive Link to Nucleotide Sequence:NM_001385719.1Link to Protein Sequence:NP_001372648.1Re-query CCDS DB by Nucleotide ID:NM_001385719Re-query CCDS DB by Protein ID:NP_001372648Link to BLAST:NP_001372648.1
Original member Current member NCBI NM_001385720.1 NP_001372649.1 Accepted alive Link to Nucleotide Sequence:NM_001385720.1Link to Protein Sequence:NP_001372649.1Re-query CCDS DB by Nucleotide ID:NM_001385720Re-query CCDS DB by Protein ID:NP_001372649Link to BLAST:NP_001372649.1
Original member Current member NCBI NM_001385721.1 NP_001372650.1 Accepted alive Link to Nucleotide Sequence:NM_001385721.1Link to Protein Sequence:NP_001372650.1Re-query CCDS DB by Nucleotide ID:NM_001385721Re-query CCDS DB by Protein ID:NP_001372650Link to BLAST:NP_001372650.1
Original member Current member NCBI NM_001385722.1 NP_001372651.1 Accepted alive Link to Nucleotide Sequence:NM_001385722.1Link to Protein Sequence:NP_001372651.1Re-query CCDS DB by Nucleotide ID:NM_001385722Re-query CCDS DB by Protein ID:NP_001372651Link to BLAST:NP_001372651.1
Original member Current member NCBI NM_001385723.1 NP_001372652.1 Accepted alive Link to Nucleotide Sequence:NM_001385723.1Link to Protein Sequence:NP_001372652.1Re-query CCDS DB by Nucleotide ID:NM_001385723Re-query CCDS DB by Protein ID:NP_001372652Link to BLAST:NP_001372652.1
Original member Current member NCBI NM_001385728.1 NP_001372657.1 Accepted alive Link to Nucleotide Sequence:NM_001385728.1Link to Protein Sequence:NP_001372657.1Re-query CCDS DB by Nucleotide ID:NM_001385728Re-query CCDS DB by Protein ID:NP_001372657Link to BLAST:NP_001372657.1
Original member Current member NCBI NM_001385729.1 NP_001372658.1 Accepted alive Link to Nucleotide Sequence:NM_001385729.1Link to Protein Sequence:NP_001372658.1Re-query CCDS DB by Nucleotide ID:NM_001385729Re-query CCDS DB by Protein ID:NP_001372658Link to BLAST:NP_001372658.1
Original member Current member NCBI NM_001385730.1 NP_001372659.1 Accepted alive Link to Nucleotide Sequence:NM_001385730.1Link to Protein Sequence:NP_001372659.1Re-query CCDS DB by Nucleotide ID:NM_001385730Re-query CCDS DB by Protein ID:NP_001372659Link to BLAST:NP_001372659.1
Original member Current member NCBI NM_173665.3 NP_775936.1 Accepted alive Link to Nucleotide Sequence:NM_173665.3Link to Protein Sequence:NP_775936.1Re-query CCDS DB by Nucleotide ID:NM_173665Re-query CCDS DB by Protein ID:NP_775936Link to BLAST:NP_775936.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001372644.1 324 Q8IV33-2 324 100% 0 0
NP_001372645.1 324 Q8IV33-2 324 100% 0 0
NP_001372646.1 324 Q8IV33-2 324 100% 0 0
NP_001372648.1 324 Q8IV33-2 324 100% 0 0
NP_001372649.1 324 Q8IV33-2 324 100% 0 0
NP_001372650.1 324 Q8IV33-2 324 100% 0 0
NP_001372651.1 324 Q8IV33-2 324 100% 0 0
NP_001372652.1 324 Q8IV33-2 324 100% 0 0
NP_001372657.1 324 Q8IV33-2 324 100% 0 0
NP_001372658.1 324 Q8IV33-2 324 100% 0 0
NP_001372659.1 324 Q8IV33-2 324 100% 0 0
NP_775936.1 324 Q8IV33-2 324 100% 0 0

Chromosomal Locations for CCDS 4070.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 94520243 94520917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 94523930 94524098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 94536996 94537126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGGATTGGGATGATGAATATTCTCATAATTCTTTTGACCTACATTGTTTGTTAAACTCATTTCCTGGAG
ACTTGGAGTTTGAGCAGATCTTCAGTGACATTGATGAAAAGATTGAACAAAATGCTGCAAGCATAAAACA
TTGCATTAAAGAGATACAGTCCGAAATTAACAAACAATGTCCAGGTGTGCAGCTGCAAACAACAACTGAC
TGCTTTGAATGGCTAACTAACTATAATTACAGTACATCTGAATCATCTTTCATTTCTCATGGAGACTTGA
TAAAATTTTTCAAAACACTGCAAGATTTGTTGAAGAATGAACAAAATCAAGAAGAAATGACATTGGATTT
ACTTTGGGACCTCTCCTGCCACAGCAGCGTTTCATTCCCATCAACCCTAAGTGGAACATCTTTCCATTTC
CTCTCTAGGACGTCTCTTCATTCTGTTGAAGATAATTCCTCTATGGATGTCAAGTCTATGTGGGATGATA
TAAGACTGCATCTTCGACGCTTCTTAGTGAGCAAATTACAAAGCCATAATGAAATAAACAATTCACAGCA
AAAAATTTTATTGAAAAAGCAGTGCTTACAACAACTCTTGTTTCTTTATCCAGAATCAGAAGTTATAATC
AAATACCAAAACATACAGAATAAACTGTTGGCTAATCTTCTGTGGAACTGCTTTCCTTCTTACAACAGAG
ATTCAAATTTAGATGTAATAGCTCATGGATATCAAAGTACAATGCTTAAGTTATACTCAGTAATAAAAGA
GGATTTTAACACACTATGTGAAATTTTAGCTCCATCTTCAATGGTGAAATTCATTAAAGAAACTTACCTG
GATACTGTTACAGAAGAAATGGCAAAATTTCTTGAAAATTTTTGTGAGCTGCAGTTCAGAGAAAATGCTG
TTCGTGTGGTTAAAACAAGCAAGAGCTCCAGCAAGCATAGAGGAGCAGTGCATGCTTTGGGTTAG

Translation (324 aa):
MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQCPGVQLQTTTD
CFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWDLSCHSSVSFPSTLSGTSFHF
LSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHNEINNSQQKILLKKQCLQQLLFLYPESEVII
KYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYL
DTVTEEMAKFLENFCELQFRENAVRVVKTSKSSSKHRGAVHALG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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