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Report for CCDS8557.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8557.1 Public Homo sapiens 12 ZNF384 24 110 108 CCDS HistoryNCBI Gene:171017Re-query CCDS DB by CCDS ID:8557.1Re-query CCDS DB by GeneID:171017See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8557.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319770.7 ENSP00000321650.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000319770.7Link to Ensembl Protein Viewer:ENSP00000321650.4Re-query CCDS DB by Nucleotide ID:ENST00000319770Re-query CCDS DB by Protein ID:ENSP00000321650
Original member Current member NCBI NM_001385739.1 NP_001372668.1 Accepted alive Link to Nucleotide Sequence:NM_001385739.1Link to Protein Sequence:NP_001372668.1Re-query CCDS DB by Nucleotide ID:NM_001385739Re-query CCDS DB by Protein ID:NP_001372668Link to BLAST:NP_001372668.1
Original member Current member NCBI NM_001385740.1 NP_001372669.1 Accepted alive Link to Nucleotide Sequence:NM_001385740.1Link to Protein Sequence:NP_001372669.1Re-query CCDS DB by Nucleotide ID:NM_001385740Re-query CCDS DB by Protein ID:NP_001372669Link to BLAST:NP_001372669.1
Original member Current member NCBI NM_001385773.1 NP_001372702.1 Accepted alive Link to Nucleotide Sequence:NM_001385773.1Link to Protein Sequence:NP_001372702.1Re-query CCDS DB by Nucleotide ID:NM_001385773Re-query CCDS DB by Protein ID:NP_001372702Link to BLAST:NP_001372702.1
Original member Current member NCBI NM_001385774.1 NP_001372703.1 Accepted alive Link to Nucleotide Sequence:NM_001385774.1Link to Protein Sequence:NP_001372703.1Re-query CCDS DB by Nucleotide ID:NM_001385774Re-query CCDS DB by Protein ID:NP_001372703Link to BLAST:NP_001372703.1
Original member Current member NCBI NM_001385775.1 NP_001372704.1 Accepted alive Link to Nucleotide Sequence:NM_001385775.1Link to Protein Sequence:NP_001372704.1Re-query CCDS DB by Nucleotide ID:NM_001385775Re-query CCDS DB by Protein ID:NP_001372704Link to BLAST:NP_001372704.1
Original member Current member NCBI NM_001385776.1 NP_001372705.1 Accepted alive Link to Nucleotide Sequence:NM_001385776.1Link to Protein Sequence:NP_001372705.1Re-query CCDS DB by Nucleotide ID:NM_001385776Re-query CCDS DB by Protein ID:NP_001372705Link to BLAST:NP_001372705.1
Original member Current member NCBI NM_001385777.1 NP_001372706.1 Accepted alive Link to Nucleotide Sequence:NM_001385777.1Link to Protein Sequence:NP_001372706.1Re-query CCDS DB by Nucleotide ID:NM_001385777Re-query CCDS DB by Protein ID:NP_001372706Link to BLAST:NP_001372706.1
Original member Current member NCBI NM_001385778.1 NP_001372707.1 Accepted alive Link to Nucleotide Sequence:NM_001385778.1Link to Protein Sequence:NP_001372707.1Re-query CCDS DB by Nucleotide ID:NM_001385778Re-query CCDS DB by Protein ID:NP_001372707Link to BLAST:NP_001372707.1
Original member Current member NCBI NM_001385779.1 NP_001372708.1 Accepted alive Link to Nucleotide Sequence:NM_001385779.1Link to Protein Sequence:NP_001372708.1Re-query CCDS DB by Nucleotide ID:NM_001385779Re-query CCDS DB by Protein ID:NP_001372708Link to BLAST:NP_001372708.1
Original member Current member NCBI NM_001385780.1 NP_001372709.1 Accepted alive Link to Nucleotide Sequence:NM_001385780.1Link to Protein Sequence:NP_001372709.1Re-query CCDS DB by Nucleotide ID:NM_001385780Re-query CCDS DB by Protein ID:NP_001372709Link to BLAST:NP_001372709.1
Original member Current member NCBI NM_001385781.1 NP_001372710.1 Accepted alive Link to Nucleotide Sequence:NM_001385781.1Link to Protein Sequence:NP_001372710.1Re-query CCDS DB by Nucleotide ID:NM_001385781Re-query CCDS DB by Protein ID:NP_001372710Link to BLAST:NP_001372710.1
Original member Current member NCBI NM_001385782.1 NP_001372711.1 Accepted alive Link to Nucleotide Sequence:NM_001385782.1Link to Protein Sequence:NP_001372711.1Re-query CCDS DB by Nucleotide ID:NM_001385782Re-query CCDS DB by Protein ID:NP_001372711Link to BLAST:NP_001372711.1
Original member Current member NCBI NM_001385783.1 NP_001372712.1 Accepted alive Link to Nucleotide Sequence:NM_001385783.1Link to Protein Sequence:NP_001372712.1Re-query CCDS DB by Nucleotide ID:NM_001385783Re-query CCDS DB by Protein ID:NP_001372712Link to BLAST:NP_001372712.1
Original member Current member NCBI NM_001385784.1 NP_001372713.1 Accepted alive Link to Nucleotide Sequence:NM_001385784.1Link to Protein Sequence:NP_001372713.1Re-query CCDS DB by Nucleotide ID:NM_001385784Re-query CCDS DB by Protein ID:NP_001372713Link to BLAST:NP_001372713.1
Original member Current member NCBI NM_001385785.1 NP_001372714.1 Accepted alive Link to Nucleotide Sequence:NM_001385785.1Link to Protein Sequence:NP_001372714.1Re-query CCDS DB by Nucleotide ID:NM_001385785Re-query CCDS DB by Protein ID:NP_001372714Link to BLAST:NP_001372714.1
Original member Current member NCBI NM_001385786.1 NP_001372715.1 Accepted alive Link to Nucleotide Sequence:NM_001385786.1Link to Protein Sequence:NP_001372715.1Re-query CCDS DB by Nucleotide ID:NM_001385786Re-query CCDS DB by Protein ID:NP_001372715Link to BLAST:NP_001372715.1
Original member Current member NCBI NM_133476.5 NP_597733.2 Accepted alive Link to Nucleotide Sequence:NM_133476.5Link to Protein Sequence:NP_597733.2Re-query CCDS DB by Nucleotide ID:NM_133476Re-query CCDS DB by Protein ID:NP_597733Link to BLAST:NP_597733.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001372668.1 516 Q8TF68-2 516 100% 0 0
NP_001372669.1 516 Q8TF68-2 516 100% 0 0
NP_001372702.1 516 Q8TF68-2 516 100% 0 0
NP_001372703.1 516 Q8TF68-2 516 100% 0 0
NP_001372704.1 516 Q8TF68-2 516 100% 0 0
NP_001372705.1 516 Q8TF68-2 516 100% 0 0
NP_001372706.1 516 Q8TF68-2 516 100% 0 0
NP_001372707.1 516 Q8TF68-2 516 100% 0 0
NP_001372708.1 516 Q8TF68-2 516 100% 0 0
NP_001372709.1 516 Q8TF68-2 516 100% 0 0
NP_001372710.1 516 Q8TF68-2 516 100% 0 0
NP_001372711.1 516 Q8TF68-2 516 100% 0 0
NP_001372712.1 516 Q8TF68-2 516 100% 0 0
NP_001372713.1 516 Q8TF68-2 516 100% 0 0
NP_001372714.1 516 Q8TF68-2 516 100% 0 0
NP_001372715.1 516 Q8TF68-2 516 100% 0 0
NP_597733.2 516 Q8TF68-2 516 100% 0 0

Chromosomal Locations for CCDS 8557.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 6667714 6668115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6669031 6669189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6670760 6670838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6673216 6673440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678127 6678460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678663 6678710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678946 6679183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6679455 6679520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1551 nt):
ATGGAAGAATCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTATCCCCACAGTCTCAGGTCAGATCG
AGAACACAATGTTCATCAACAAGATGAAGGATCAGCTGTTGCCAGAGAAGGGCTGTGGTCTGGCCCCACC
TCACTACCCCACCTTGCTGACAGTGCCTGCCTCAGTGTCCCTGCCCTCAGGCATCAGTATGGACACAGAG
TCCAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGTCCCTGTGC
CGTCTACAGGACTGATGACTGCTGGAGTCTCCTGTTCTCAGAGGTGGAGAAGAGAAGGGAGTCAATCAAG
GGGTCCGGGTTTGGTAATCACGTCCCCCTCAGGCTCTCTTGTGACCACAGCATCATCAGCTCAGACCTTC
CCCATTTCGGCTCCCATGATTGTCTCAGCTCTTCCCCCTGGCTCACAAGCCCTGCAGGTTGTCCCTGACC
TCTCCAAGAAGGTAGCATCGACCCTAACCGAGGAAGGAGGCGGAGGTGGTGGTGGAGGTGGCAGTGTGGC
TCCTAAGCCACCCCGGGGCCGGAAGAAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATGAATGACCCT
TATGTCCTCTCCCCTGAGGATGATGATGACCATCAGAAAGACGGCAAGACCTACAGGTGCCGGATGTGCT
CACTGACATTCTACTCCAAGTCGGAGATGCAGATCCACTCCAAGTCACACACCGAGACCAAGCCCCACAA
GTGCCCACATTGCTCCAAGACCTTCGCCAACAGCTCCTACCTGGCCCAGCACATCCGTATACACTCAGGG
GCTAAGCCCTACAGTTGTAACTTCTGTGAGAAATCCTTCCGCCAGCTCTCCCACCTTCAGCAGCACACCC
GAATCCACACTGGTGATAGACCATACAAATGTGCACACCCAGGCTGTGAGAAAGCCTTCACACAACTCTC
CAATCTGCAGTCCCACAGACGGCAACACAACAAAGATAAACCCTTCAAGTGCCACAACTGTCATCGGGCG
TACACGGATGCAGCCTCACTAGAGGTGCACCTGTCTACGCACACAGTGAAGCATGCCAAGGTGTACACCT
GCACTATCTGCAGTCGGGCATACACATCAGAAACATACCTTATGAAACATATGCGCAAACACAACCCGCC
TGATCTTCAGCAACAGGTGCAGGCAGCAGCAGCAGCGGCAGCAGTGGCCCAGGCCCAGGCTCAAGCTCAA
GCCCAGGCTCAGGCTCAGGCTCAAGCCCAGGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGCCCC
CCAGGGTGGGGGTGGTGGGGACAGCAATCCCAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCGTAT
AAGACGGCGGAGCATCATAAGGACATCTGCCTCACTGTCACCACCAGCACCATCCAGGTGGAGCACCTGG
CCAGCTCTTAG

Translation (516 aa):
MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLPSGISMDTE
SKSDQLTPHSQASVTQNITVVPVPSTGLMTAGVSCSQRWRREGSQSRGPGLVITSPSGSLVTTASSAQTF
PISAPMIVSALPPGSQALQVVPDLSKKVASTLTEEGGGGGGGGGSVAPKPPRGRKKKRMLESGLPEMNDP
YVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSG
AKPYSCNFCEKSFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRA
YTDAASLEVHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAAAAAAAVAQAQAQAQ
AQAQAQAQAQAQAQASQASQQQQQQQQQQQQQQQQPPPHFQSPGAAPQGGGGGDSNPNPPPQCSFDLTPY
KTAEHHKDICLTVTTSTIQVEHLASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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