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Report for CCDS32900.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32900.1 Public Homo sapiens 19 OR7D2 24 110 108 CCDS HistoryNCBI Gene:162998Re-query CCDS DB by CCDS ID:32900.1Re-query CCDS DB by GeneID:162998See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 32900.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344248.4 ENSP00000345563.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344248.4Link to Ensembl Protein Viewer:ENSP00000345563.2Re-query CCDS DB by Nucleotide ID:ENST00000344248Re-query CCDS DB by Protein ID:ENSP00000345563
Original member Current member EBI ENST00000642043.1 ENSP00000492939.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642043.1Link to Ensembl Protein Viewer:ENSP00000492939.1Re-query CCDS DB by Nucleotide ID:ENST00000642043Re-query CCDS DB by Protein ID:ENSP00000492939
Original member Current member EBI ENST00000641288.2 ENSP00000493200.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641288.2Link to Ensembl Protein Viewer:ENSP00000493200.1Re-query CCDS DB by Nucleotide ID:ENST00000641288Re-query CCDS DB by Protein ID:ENSP00000493200
Original member Current member NCBI NM_001386112.1 NP_001373041.1 Accepted alive Link to Nucleotide Sequence:NM_001386112.1Link to Protein Sequence:NP_001373041.1Re-query CCDS DB by Nucleotide ID:NM_001386112Re-query CCDS DB by Protein ID:NP_001373041Link to BLAST:NP_001373041.1
Original member Current member NCBI NM_175883.4 NP_787079.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175883.4Link to Protein Sequence:NP_787079.1Re-query CCDS DB by Nucleotide ID:NM_175883Re-query CCDS DB by Protein ID:NP_787079Link to BLAST:NP_787079.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373041.1 312 Q96RA2 312 100% 0 0
NP_787079.1 312 Q96RA2 312 100% 0 0

Chromosomal Locations for CCDS 32900.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9185782 9186720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAAGCAGGAAACCAAACAGGATTTTTAGAGTTTATCCTTCTCGGACTCTCTGAGGATCCAGAACTAC
AGCCGTTCATATTTGGGCTGTTCCTGTCCATGTACCTGGTGACGGTGCTGGGAAACCTGCTCATCATCCT
GGCCATCAGCTCTGACTCCCACCTCCACACCCCCATGTACTTCTTCCTCTCCAACCTGTCCTGGGTTGAC
ATCTGTTTCAGCACTTGCATCGTCCCCAAGATGCTGGTGAACATCCAGACCGAGAACAAAGCCATCTCCT
ACATGGACTGCCTCACACAGGTCTATTTCTCCATGTTTTTTCCTATTCTGGACACGCTACTCCTGACCGT
GATGGCCTATGACCGGTTTGTGGCTGTCTGCCACCCTCTGCACTATATGATCATCATGAACCCCCACCTC
TGTGGCCTCCTGGTTTTTGTCACCTGGCTCATTGGTGTCATGACATCCCTCCTCCATATTTCTCTGATGA
TGCATCTAATCTTCTGTAAAGATTTTGAAATTCCACATTTTTTCTGCGAACTGACGTACATCCTCCAGCT
GGCCTGCTCTGATACCTTCCTGAACAGCACGTTGATATACTTTATGACGGGTGTGCTGGGCGTTTTTCCC
CTCCTTGGGATCATTTTCTCTTATTCACGAATTGCTTCATCCATAAGGAAGATGTCCTCATCTGGGGGAA
AACAAAAAGCACTTTCCACCTGTGGGTCTCACCTCTCCGTCGTTTCTTTATTTTATGGGACAGGCATTGG
GGTCCACTTCACTTCTGCGGTGACTCACTCTTCCCAGAAAATCTCCGTGGCCTCGGTGATGTACACTGTG
GTCACCCCCATGTTGAACCCCTTCATCTACAGCCTGAGGAACAAGGATGTGAAGGGAGCCCTGGGGAGTC
TCCTCAGCAGGGCAGCCTCTTGTTTGTGA

Translation (312 aa):
MEAGNQTGFLEFILLGLSEDPELQPFIFGLFLSMYLVTVLGNLLIILAISSDSHLHTPMYFFLSNLSWVD
ICFSTCIVPKMLVNIQTENKAISYMDCLTQVYFSMFFPILDTLLLTVMAYDRFVAVCHPLHYMIIMNPHL
CGLLVFVTWLIGVMTSLLHISLMMHLIFCKDFEIPHFFCELTYILQLACSDTFLNSTLIYFMTGVLGVFP
LLGIIFSYSRIASSIRKMSSSGGKQKALSTCGSHLSVVSLFYGTGIGVHFTSAVTHSSQKISVASVMYTV
VTPMLNPFIYSLRNKDVKGALGSLLSRAASCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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