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Report for CCDS20736.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20736.1 Public Mus musculus 7 Eps8l1 23 108 98 CCDS HistoryNCBI Gene:67425Re-query CCDS DB by CCDS ID:20736.1Re-query CCDS DB by GeneID:67425See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20736.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086372.7 ENSMUSP00000083559.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086372.7Link to Ensembl Protein Viewer:ENSMUSP00000083559.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000086372Re-query CCDS DB by Protein ID:ENSMUSP00000083559
Original member Current member EBI ENSMUST00000163893.7 ENSMUSP00000125840.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163893.7Link to Ensembl Protein Viewer:ENSMUSP00000125840.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000163893Re-query CCDS DB by Protein ID:ENSMUSP00000125840
Original member Current member NCBI NM_001290416.1 NP_001277345.1 Accepted alive Link to Nucleotide Sequence:NM_001290416.1Link to Protein Sequence:NP_001277345.1Re-query CCDS DB by Nucleotide ID:NM_001290416Re-query CCDS DB by Protein ID:NP_001277345Link to BLAST:NP_001277345.1
Original member Current member NCBI NM_026146.4 NP_080422.1 Accepted alive Link to Nucleotide Sequence:NM_026146.4Link to Protein Sequence:NP_080422.1Re-query CCDS DB by Nucleotide ID:NM_026146Re-query CCDS DB by Protein ID:NP_080422Link to BLAST:NP_080422.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277345.1 716 Q8R5F8 716 100% 0 0
NP_080422.1 716 Q8R5F8 716 100% 0 0

Chromosomal Locations for CCDS 20736.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4465396 4465412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4468854 4468894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4469196 4469254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4469881 4470042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4470283 4470432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4470808 4470890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4471227 4471488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4471796 4471922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4472113 4472201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4472299 4472373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4472475 4472623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4473931 4474072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4474185 4474213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4477330 4477459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4477564 4477695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4477890 4477998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4478140 4478314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4478619 4478751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4478841 4478927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2151 nt):
ATGAGCACCACCACAGGGCCTGAAGCTGCACCCAAACCAAGTGCAAAGTCTATCTATGAACAGAGAAAAC
GTTACTCCACCGTGGTTATGGCTGACGTGTCCCAGTATCATGTCAATCACCTGGTCACCTTCTGCTTGGG
GGAAGAAGATGGCGTGCACACTGTGGAAGATGCTTCCAGAAAGCTGGCAGTCATGGACAGCCAGGGGCGT
GTCTGGGCACAGGAGATGCTACTGAGAGTGTCACCTAGTCAAGTCACTCTGCTTGATCCAGTCTCCAAGG
AAGAACTAGAGTCATATCCTCTCGATGCCATCGTACGCTGCGACGCGGTGATGCCCCGAGGACGGAGCCG
TTCATTGCTGCTCCTGGTGTGCCAGGAGCCAGAGCGTGCACAGCCGGATGTTCATTTCTTCCAGGGCCTG
CTCCTCGGAGCGGAGCTGATCCGTGAGGACATCCAAGGGGCTCTGCAGAACTACCGCTCCGGACGTGGAG
AACGCAGGGCAGCAGCGCTCAGGGCGACGCAGGAGGAGCTGCGACGCGGCGCCTCTCCAGCAGCGGAGAC
CCCGCCCTTACAGCGTCGCCCGTCTGTCCGCCTGGTGATCAACACCGTGGAACCATCCGCAGTCCGCGGG
CGACCCCAAGTGGAGTCAATTCCAGAGACTGAGGAAGCAAGGAAACCCGACCAAGCTCGCACGACTAGCA
GTGCTGACCCTACCTCCCCAGACTTGGGCCCAAGAGGACCTGAGCTGGCGGGTCTGCAGGCAGAGCGGGA
TGTGGATATTCTGAACCACGTGTTTGACGACGTGGAGAGTTTTGTATCCAGACTGCAAAAATCAGCAGAG
GCTACCCGGGTTTTGGAGCACCGCGAGAGAGGCCGCAGGACACGACGCCGAGCTGCGGGAGAGGGTCTGC
TGACACTGAGGGCCAAGCCACCCACTGAGGCTGAGTACACCGACGTGCTTCAGAAAATCAAATACGCCTT
CAGTCTGCTGGCCCGGTTGCGAGGCAACATCGCCAACCCCTCCTCTCCAGAGCTGTTGCACTTTCTGTTT
GGACCTCTGCAGATGATTGTGAACACTTCAGGCGGCCCTGAGTTCGCGAAGAGTGTGCGACGACCGCATT
TGACGTTGGAGGCTGTGACTCTGCTCCGCGACAATGTCACTCCTGGTGAAAATGAACTATGGACCTCGCT
GGGAGACTCCTGGACCTGCCCAGGGGTGGAGCTGCCCCCGGAAGAAGGGTCTCCATACAGTCCGGAATTC
TACAATGGCTGGGAGCCTCCGGCCACTGATCCACAGGGCCGCCCCTGGGAGGACCCAGTGGAAAAACAGC
TACAACACGAGAAGCGGCGCAGGCAGCAAAGCGCCCCCCAGGTCGCGGTCAATGGTCAGCAAGATCCAGA
ACTGGAAACTGAGTCCCAGCTAGAAGAGAAAGCCAGAAAATGGGTTCTGTGTAATTATGACTTCCAGGCC
CGAAATGGCAGCGAGCTATCTGTCAAGCACCGAGATGTGTTGGAGGTCCTGGATGACAGGCGCAAATGGT
GGAAGGTTCGGGACCATCAGGGACAAGAGGGCTATGTACCCTATAATATCCTGACACCCCACCCTGGACC
TCAGGTGCACCGCAGCCAAAGCCCCGCAAGACACCTAGAGACTAGCACACCTCCTCCCCCACCTGCCCCA
GCTCCAGCCCCAACTCAGGTGCGGCCCCAGTGGGACAGTTGCGACAGTCTAAACAGTTTGGATCCCAGCG
AGAAGGAGAAATTCTCCCAGATGCTTTGTGTCAATGAGGAGCTGCAGTCGCGCCTGGCGCAGGGCCGTTC
GGGTCCCAGCCGGGTAACCCCGGGGCCCCGAGCCCAAGAGCCCCAGCTCAGCCCGCGCTCTGAGGCCTCG
GTGGTCCGTGCCTGGCTGCAGACCAAGGGCTTTAGCTCCGGGACTGTGGAGGCGCTCGGTGTGCTGACCG
GCGCACAGCTCTTCTCGCTGCAAAAGGAAGAGTTGCGGGCGGTGTGCCCCGAGGAAGGGGCGCGAGTGTA
CAGCCAAGTCACTGTGCAGCGCGCGCTGCTGGAGGACAGAGAAAAAGTATCAGAGCTGGAGGCCGTGATG
GAGAAGCAAAAGAAAAAAGTGGAAGGCGAGACCAAAACAGAAGTCATTTGA

Translation (716 aa):
MSTTTGPEAAPKPSAKSIYEQRKRYSTVVMADVSQYHVNHLVTFCLGEEDGVHTVEDASRKLAVMDSQGR
VWAQEMLLRVSPSQVTLLDPVSKEELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGL
LLGAELIREDIQGALQNYRSGRGERRAAALRATQEELRRGASPAAETPPLQRRPSVRLVINTVEPSAVRG
RPQVESIPETEEARKPDQARTTSSADPTSPDLGPRGPELAGLQAERDVDILNHVFDDVESFVSRLQKSAE
ATRVLEHRERGRRTRRRAAGEGLLTLRAKPPTEAEYTDVLQKIKYAFSLLARLRGNIANPSSPELLHFLF
GPLQMIVNTSGGPEFAKSVRRPHLTLEAVTLLRDNVTPGENELWTSLGDSWTCPGVELPPEEGSPYSPEF
YNGWEPPATDPQGRPWEDPVEKQLQHEKRRRQQSAPQVAVNGQQDPELETESQLEEKARKWVLCNYDFQA
RNGSELSVKHRDVLEVLDDRRKWWKVRDHQGQEGYVPYNILTPHPGPQVHRSQSPARHLETSTPPPPPAP
APAPTQVRPQWDSCDSLNSLDPSEKEKFSQMLCVNEELQSRLAQGRSGPSRVTPGPRAQEPQLSPRSEAS
VVRAWLQTKGFSSGTVEALGVLTGAQLFSLQKEELRAVCPEEGARVYSQVTVQRALLEDREKVSELEAVM
EKQKKKVEGETKTEVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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