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Report for CCDS42151.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42151.1 Public Homo sapiens 16 ZNF688 24 110 108 CCDS HistoryNCBI Gene:146542Re-query CCDS DB by CCDS ID:42151.1Re-query CCDS DB by GeneID:146542See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42151.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000563276.5 ENSP00000455227.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000563276.5Link to Ensembl Protein Viewer:ENSP00000455227.2Re-query CCDS DB by Nucleotide ID:ENST00000563276Re-query CCDS DB by Protein ID:ENSP00000455227
Original member Current member NCBI NM_001024683.2 NP_001019854.1 Accepted alive Link to Nucleotide Sequence:NM_001024683.2Link to Protein Sequence:NP_001019854.1Re-query CCDS DB by Nucleotide ID:NM_001024683Re-query CCDS DB by Protein ID:NP_001019854Link to BLAST:NP_001019854.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001019854.1 262 P0C7X2-5 262 100% 0 0

Chromosomal Locations for CCDS 42151.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30569916 30570436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30571010 30571123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30572122 30572275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGCCGAGGTCTCCGCTGCGCTCCAGTCTGTCAACAGAGGCTTCAGGACCGCGGGGTCCCTTCAAATGCC
CCGCCAGTCCCAGGCCAATCACCGCGCAGCTTCTTCCGGGATCGTCGCCAATCATCGGCCGTTGCGTATT
GCGGGTACAGAGGGGATTCCCAGGCCCCAAACCAGCCCTCATCTCTTGGATGGAACAGGAGAGTGAGGCT
TGGAGCCCCGCCGCCCAGGATCCTGAGAAGGGGGAAAGACTGGGAGGAGCTCGGAGAGGAGATGTCCCAA
ACAGGAAGGAAGAGGAACCGGAGGAAGTCCCAAGAGCCAAAGGGCCTAGAAAGGCTCCTGTGAAGGAGAG
TCCTGAAGTGCTGGTGGAACGCAACCCTGACCCAGCTATTAGCGTGGCCCCGGCACGGGCACAGCCACCC
AAAAATGCTGCCTGGGACCCGACCACAGGAGCACAGCCCCCGGCACCCATACCCAGCATGGATGCTCAGG
CCGGCCAGCGGCGCCACGTGTGCACGGACTGCGGCCGCCGCTTCACCTACCCCTCACTGCTGGTCAGCCA
CAGGCGCATGCACTCGGGGGAGCGGCCTTTCCCCTGCCCCGAGTGTGGCATGCGCTTCAAGAGGAAGTTC
GCAGTGGAAGCGCACCAGTGGATCCACCGCTCCTGCTCCGGGGGGCGGCGGGGCCGGAGGCCTGGGATCC
GGGCTGTGCCTCGGGCCCCCGTCCGAGGTGACCGGGACCCGCCTGTGCTCTTCCGGCACTACCCAGACAT
CTTCGAGGAGTGCGGCTGA

Translation (262 aa):
MPRSPLRSSLSTEASGPRGPFKCPASPRPITAQLLPGSSPIIGRCVLRVQRGFPGPKPALISWMEQESEA
WSPAAQDPEKGERLGGARRGDVPNRKEEEPEEVPRAKGPRKAPVKESPEVLVERNPDPAISVAPARAQPP
KNAAWDPTTGAQPPAPIPSMDAQAGQRRHVCTDCGRRFTYPSLLVSHRRMHSGERPFPCPECGMRFKRKF
AVEAHQWIHRSCSGGRRGRRPGIRAVPRAPVRGDRDPPVLFRHYPDIFEECG


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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