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Report for CCDS55903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55903.1 Public Homo sapiens 13 NAXD 24 110 108 CCDS HistoryNCBI Gene:55739Re-query CCDS DB by CCDS ID:55903.1Re-query CCDS DB by GeneID:55739See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55903.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424185.7 ENSP00000413191.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424185.7Link to Ensembl Protein Viewer:ENSP00000413191.2Re-query CCDS DB by Nucleotide ID:ENST00000424185Re-query CCDS DB by Protein ID:ENSP00000413191
Original member Current member NCBI NM_001242883.2 NP_001229812.1 Accepted alive Link to Nucleotide Sequence:NM_001242883.2Link to Protein Sequence:NP_001229812.1Re-query CCDS DB by Nucleotide ID:NM_001242883Re-query CCDS DB by Protein ID:NP_001229812Link to BLAST:NP_001229812.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229812.1 237 Q8IW45-4 237 100% 0 0

Chromosomal Locations for CCDS 55903.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 110615592 110615647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110627439 110627547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110634545 110634595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110634672 110634776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110635468 110635588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110637129 110637249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110638378 110638528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (714 nt):
ATGCTGCCCGATGGCCCTGGGTCCTCGCTGTGGGGCAATCCGGGCTTGCAGACGAGTGACAGCCCCAATG
CTGTTCATGAGGTGGAGAAGTGGCTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGGTAGAGA
TGATGCGCTTCTCAGAAATGTCCAGGGCATTTTGGAAGTGTCAAAGGCCAGGGACATCCCTGTTGTCATC
GACGCGGATGGCCTGTGGCTGGTCGCTCAGCAGCCGGCCCTCATCCATGGCTACCGGAAGGCTGTGCTCA
CTCCCAACCACGTGGAGTTCAGCAGACTGTATGACGCTGTGCTCAGAGGCCCTATGGACAGCGATGACAG
CCATGGATCTGTGCTAAGACTCAGCCAAGCCCTGGGCAACGTGACGGTGGTCCAGAAAGGAGAGCGCGAC
ATCCTCTCCAACGGCCAGCAGGTGCTTGTGTGCAGCCAGGAAGGCAGCAGCCGCAGGTGTGGAGGGCAAG
GGGACCTCCTGTCGGGCTCCCTGGGCGTCCTGGTACACTGGGCGCTCCTTGCTGGACCACAGAAAACAAA
TGGGTCCAGCCCTCTCCTGGTGGCCGCGTTTGGCGCCTGCTCTCTCACCAGGCAGTGCAACCACCAAGCC
TTCCAGAAGCACGGTCGCTCCACCACCACCTCCGACATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGC
TCTTTGAAACCTGA

Translation (237 aa):
MLPDGPGSSLWGNPGLQTSDSPNAVHEVEKWLPRLHALVVGPGLGRDDALLRNVQGILEVSKARDIPVVI
DADGLWLVAQQPALIHGYRKAVLTPNHVEFSRLYDAVLRGPMDSDDSHGSVLRLSQALGNVTVVQKGERD
ILSNGQQVLVCSQEGSSRRCGGQGDLLSGSLGVLVHWALLAGPQKTNGSSPLLVAAFGACSLTRQCNHQA
FQKHGRSTTTSDMIAEVGAAFSKLFET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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