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Report for CCDS2661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2661.1 Public Homo sapiens 3 ARPP21 24 110 108 CCDS HistoryNCBI Gene:10777Re-query CCDS DB by CCDS ID:2661.1Re-query CCDS DB by GeneID:10777See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000187397.8 ENSP00000187397.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000187397.8Link to Ensembl Protein Viewer:ENSP00000187397.4Re-query CCDS DB by Nucleotide ID:ENST00000187397Re-query CCDS DB by Protein ID:ENSP00000187397
Original member Current member NCBI NM_016300.5 NP_057384.2 Accepted alive Link to Nucleotide Sequence:NM_016300.5Link to Protein Sequence:NP_057384.2Re-query CCDS DB by Nucleotide ID:NM_016300Re-query CCDS DB by Protein ID:NP_057384Link to BLAST:NP_057384.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057384.2 812 Q9UBL0-1 812 100% 0 0

Chromosomal Locations for CCDS 2661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 35681752 35681880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35682848 35682889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35683726 35683815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35687739 35687883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35689307 35689385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35690081 35690140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35690865 35691005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35706974 35707082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35708969 35709070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35715439 35715476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35717298 35717357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35721605 35721834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35729303 35729536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35737178 35737362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35739317 35739577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35743839 35743965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35792382 35792530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35793701 35793958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2439 nt):
ATGTCTGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTC
CAGAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAAGAGGAGAAACTGGAACTGCAGAGGCGGCTGGA
GGCTCAGAATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGTAAACTGACTCGCAGCCTTGCT
GTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGGAATCAATTCATTTACAGC
TTTCCAGTTTTTCCAGCCTGCAAGAGGAGGATAAATCTAGGAAAGATGACTCTGAAAGAGAAAAAGAAAA
GGATAAAAACAAAGATAAAACCTCTGAAAAACCCAAGATCAGAATGTTATCAAAAGATTGCAGCCAAGAA
TACACGGATTCTACAGGCATAGACTTACACGAGTTTCTGATTAACACATTAAAGAATAATTCCAGGGACA
GGATGATACTTTTGAAAATGGAGCAGGAAATTATTGATTTCATTGCTGACAACAATAATCATTATAAAAA
GTTCCCTCAGATGTCATCGTATCAGAGGATGCTTGTCCATCGAGTGGCAGCTTATTTTGGATTGGATCAC
AATGTGGATCAAACAGGAAAATCTGTTATCATCAACAAGACCAGCAGCACCAGAATACCAGAGCAAAGGT
TTTGTGAACATTTAAAAGATGAAAAAGGTGAAGAATCCCAGAAGCGGTTTATCTTGAAGCGAGATAACTC
TAGTATTGATAAAGAAGACAATCAGCAAAACAGAATGCATCCATTTAGAGATGACAGACGAAGTAAATCA
ATTGAAGAGAGAGAAGAGGAATATCAGAGAGTGAGGGAGAGAATATTTGCACACGATTCAGTTTGCTCCC
AGGAAAGCCTTTTTGTGGAAAACAGTAGGCTCTTGGAAGACAGTAACATATGCAATGAGACCTATAAGAA
AAGACAGCTCTTTCGGGGCAACAGAGATGGCTCAGGGAGAACATCTGGGAGTCGACAGAGCAGCTCAGAA
AATGAACTCAAGTGGTCTGACCACCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTTCCAACCGCAATC
TAAAGCCCGCCATGACCAAGACGGCGAGTTTTGGGGGCATCACGGTGCTGACCAGGGGTGACAGCACTTC
CAGTACTAGGAGTACCGGGAAGCTGTCCAAAGCAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGA
TCGCTGTCCCGCACCCATCCACCTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAGCTGGCTCTCCAG
GCTGTGTGCCTTATCCAGAGAATGGAATAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCCT
TCCACTTGAAGCTGCAACAGGCATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTTT
GTGAATCCCGATGGAACTCCTGCAATATACAACCCACCCACCAGTCAGCAGCCCCTGCGAAGCGCCATGG
TGGGGCAGTCCCAACAGCAGCCACCACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCCACC
GCAGCCACAGATGGCAGGCCCTCTGGTCACTCAGAGAGATGATGTGGCAACACAGTTTGGCCAGATGACC
CTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCATCCTCCCTTATGC
CACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAGCAGCTTCCTACAGGAGGATTCTC
AGGCTCTGGCCCTCCCATCTCCCAGCAGGTCCTCCAGCCCCCTCCCTCACCACAGGGATTTGTGCAACAG
CCTCCGCCTGCACAGATGCCTGTATATTATTACCCATCTGGTCAGTACCCTACCTCAACCACGCAACAGT
ACCGGCCCATGGCCCCGGTTCAGTACAACGCTCAGAGGAGTCAACAGATGCCACAGGCAGCACAGCAAGC
AGGTTACCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGGCCTAATAGGAGTGCAGCAGCCACCTCAG
AGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAATGT
CTTCTTATCAGGTGCCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCAGTCATACCAACAGCCAATCAT
GCTACCTAACCAGGCAGGTCAAGGGTCACTCCCAGCCACTGGAATGCCTGTTTACTGTAATGTCACACCG
CCCACCCCTCAGAACAACCTTAGGCTGATTGGCCCACACTGCCCCTCCAGCACTGTCCCAGTGATGTCAG
CTAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGA

Translation (812 aa):
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLA
VCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKNKDKTSEKPKIRMLSKDCSQE
YTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQMSSYQRMLVHRVAAYFGLDH
NVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKS
IEEREEEYQRVRERIFAHDSVCSQESLFVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSE
NELKWSDHQRAWSSTDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSG
SLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPF
VNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMT
LSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQ
PPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQ
SQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTP
PTPQNNLRLIGPHCPSSTVPVMSASCRTNCASMSNAGWQVKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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