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Report for CCDS44871.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44871.1 Public Homo sapiens 12 FKBP11 24 110 108 CCDS HistoryNCBI Gene:51303Re-query CCDS DB by CCDS ID:44871.1Re-query CCDS DB by GeneID:51303See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44871.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453172.2 ENSP00000396874.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453172.2Link to Ensembl Protein Viewer:ENSP00000396874.2Re-query CCDS DB by Nucleotide ID:ENST00000453172Re-query CCDS DB by Protein ID:ENSP00000396874
Original member Current member NCBI NM_001143782.2 NP_001137254.1 Accepted alive Link to Nucleotide Sequence:NM_001143782.2Link to Protein Sequence:NP_001137254.1Re-query CCDS DB by Nucleotide ID:NM_001143782Re-query CCDS DB by Protein ID:NP_001137254Link to BLAST:NP_001137254.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137254.1 146 Q9NYL4-2 146 100% 0 0

Chromosomal Locations for CCDS 44871.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 48923552 48923604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48923782 48923852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48924223 48924256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48924561 48924648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48925046 48925111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48925300 48925428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGACCCTGCGCCCCTCACTCCTCCCGCTCCATCTGCTGCTGCTGCTGCTGCTCAGTGCGGCGGTGTGCC
GGGCTGAGGCTGGGCTCGAAACCGAAAGTCCCGTCCGGACCCTCCAAGTGGAGACCCTGGTGGAGCCCCC
AGAACCATGTGCCGAGCCCGCTGCTTTTGGAGACACGCTTCACATACACTACACGGGAAGCTTGGTAGAT
GGACGTATTATTGACACCTCCCTGACCAGAGACCCTCTGGTTATAGAACTTGGCCAAAAGCAGGTGATTC
CAGGTCTGGAGCAGAGTCTTCTCGACATGTGTGTGGGAGAGAAGCGAAGGGCAATCATTCCTTCTCACTT
GGCCTATGGAAAACGGGGATTTCCACCATCTGTCCCAGGGACTAAAGACAACCTGATGAGGCCACCTGGC
ATGACCTCCAGCAGCCAGTAA

Translation (146 aa):
MTLRPSLLPLHLLLLLLLSAAVCRAEAGLETESPVRTLQVETLVEPPEPCAEPAAFGDTLHIHYTGSLVD
GRIIDTSLTRDPLVIELGQKQVIPGLEQSLLDMCVGEKRRAIIPSHLAYGKRGFPPSVPGTKDNLMRPPG
MTSSSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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