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Report for CCDS32520.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32520.1 Public Homo sapiens 17 GLOD4 24 110 108 CCDS HistoryNCBI Gene:51031Re-query CCDS DB by CCDS ID:32520.1Re-query CCDS DB by GeneID:51031See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32520.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301329.11 ENSP00000301329.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301329.11Link to Ensembl Protein Viewer:ENSP00000301329.6Re-query CCDS DB by Nucleotide ID:ENST00000301329Re-query CCDS DB by Protein ID:ENSP00000301329
Original member Current member NCBI NM_016080.4 NP_057164.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016080.4Link to Protein Sequence:NP_057164.3Re-query CCDS DB by Nucleotide ID:NM_016080Re-query CCDS DB by Protein ID:NP_057164Link to BLAST:NP_057164.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057164.3 298 Q9HC38-2 298 100% 0 0

Chromosomal Locations for CCDS 32520.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 760173 760238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 769869 769955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 770044 770157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 770421 770507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 771325 771461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 775775 775919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 776868 776988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 778695 778744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 782166 782255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (897 nt):
ATGGCTGCTCGCAGAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCTTCCAGACGGCGCGTTTCTATC
GGGACGTCCTGGGGATGAAGGTTCTGCGGCATGAGGAATTTGAAGAAGGCTGCAAAGCTGCCTGTAATGG
GCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAA
CTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGCAATGACTTTATGGGAATCACGCTCGCTTCTA
GCCAGGCTGTCAGCAACGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAAC
CGAGGCCCCGGGAGGATATAAGTTCTATTTGCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATTAAAA
GTAACTCTAGCAGTGTCTGATCTTCAAAAGTCCTTGAACTACTGGTGTAATCTACTGGGAATGAAAATTT
ATGAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGGAGCTACA
GGGCGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATTGCCTTCTCTTGCCCCCAGAAAGAG
TTGCCAGACTTAGAAGACTTGATGAAAAGGGAGAACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACA
CCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGG
GGATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCA
GCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAGGTTAA

Translation (298 aa):
MAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAE
LTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLK
VTLAVSDLQKSLNYWCNLLGMKIYEKDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGRIAFSCPQKE
LPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFRELSKMDPEGSKLLDDAMA
ADKSDEWFAKHNKPKASG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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