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Report for CCDS74397.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74397.1 Public Homo sapiens 19 POLR1G 24 110 108 CCDS HistoryNCBI Gene:10849Re-query CCDS DB by CCDS ID:74397.1Re-query CCDS DB by GeneID:10849See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74397.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000589804.1 ENSP00000465099.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589804.1Link to Ensembl Protein Viewer:ENSP00000465099.1Re-query CCDS DB by Nucleotide ID:ENST00000589804Re-query CCDS DB by Protein ID:ENSP00000465099
Original member Current member NCBI NM_001297590.3 NP_001284519.1 Accepted alive Link to Nucleotide Sequence:NM_001297590.3Link to Protein Sequence:NP_001284519.1Re-query CCDS DB by Nucleotide ID:NM_001297590Re-query CCDS DB by Protein ID:NP_001284519Link to BLAST:NP_001284519.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284519.1 512 O15446-2 512 100% 0 0

Chromosomal Locations for CCDS 74397.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45406697 45406724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45407094 45407235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45408133 45409501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1539 nt):
ATGGAGGAGCCCCAGGCCGGCGGTGAGGATGCTGCTCGGTTCTCTTGTCCCCCCAACTTTACCGCGAAGC
CCCCAGCCTCAGAGTCCCCTCGTTTCTCCTTGGAGGCGCTGACGGGTCCAGATACGGAGCTGTGGCTTAT
TCAGGCCCCTGCAGACTTTGCCCCAGAATGCTTCAATGGGCGGCATGTGCCTCTCTCTGGCTCCCAGATC
GTCAAGGGCAAATTGGCAGGCAAGCGGCACCGCTATCGAGTCCTCAGCAGCTGTCCCCAAGCTGGAGAAG
CGACCCTGCTGGCCCCCTCAACGGAGGCAGGAGGTGGACTCACCTGTGCCTCAGCCCCCCAGGGCACCCT
AAGGATCCTTGAGGGTCCCCAGCAATCCCTGTCAGGGAGCCCTCTGCAGCCCATCCCAGCAAGTCCCCCA
CCACAGATCCCTCCTGGCCTGAGGCCTCGGTTCTGTGCCTTTGGGGGCAACCCACCAGTCACAGGGCCTA
GGTCAGCCTTGGCCCCCAACCTGCTCACCTCAGGGAAGAAGAAAAAGGAGATGCAGGTGACAGAGGCCCC
AGTCACTCAGGAGGCAGTGAATGGGCACGGGGCCCTGGAGGTGGACATGGCTTTGGGGTCGCCAGAAATG
GATGTGCGGAAGAAGAAGAAGAAAAAAAATCAGCAGCTGAAAGAACCAGAGGCAGCAGGGCCTGTGGGGA
CAGAGCCCACAGTGGAGACACTGGAGCCTCTGGGAGTGCTGTTCCCGTCCACCACCAAGAAGAGGAAGAA
GCCCAAAGGGAAAGAAACCTTCGAGCCAGAAGACAAGACAGTGAAGCAGGAACAGATTAACACTGAGCCT
CTAGAAGACACAGTCCTGTCCCCGACCAAAAAGAGAAAGAGGCAAAAGGGGACGGAAGGGATGGAGCCAG
AGGAGGGGGTGACAGTTGAGTCTCAGCCACAGGTGAAGGTGGAGCCACTGGAGGAAGCCATCCCTCTGCC
CCCTACGAAGAAGAGGAAAAAAGAAAAGGGACAGATGGCAATGATGGAGCCAGGGACGGAGGCGATGGAG
CCAGTGGAGCCGGAGATGAAGCCTCTGGAGTCCCCAGGGGGGACCATGGCGCCTCAACAGCCAGAAGGAG
CGAAGCCTCAGGCCCAGGCAGCTCTGGCAGCTCCCAAAAAGAAGACGAAGAAAGAAAAACAGCAAGATGC
CACAGTGGAGCCAGAGACAGAGGTGGTGGGGCCTGAGCTGCCGGATGACCTTGAGCCTCAGGCAGCTCCC
ACATCCACCAAGAAGAAGAAGAAGAAGAAAGAGAGAGGTCACACAGTGACTGAGCCAATTCAGCCACTAG
AGCCTGAACTGCCAGGGGAGGGACAGCCTGAAGCCAGGGCAACTCCGGGATCCACCAAGAAGAGGAAGAA
GCAGAGTCAGGAAAGCCGGATGCCAGAGACAGTGCCCCAAGAGGAGATGCCAGGGCCGCCACTGAATTCA
GAGTCTGGGGAGGAGGCTCCCACAGGCCGGGACAAGAAGCGGAAGCAGCAGCAGCAGCAGCCTGTGTAG

Translation (512 aa):
MEEPQAGGEDAARFSCPPNFTAKPPASESPRFSLEALTGPDTELWLIQAPADFAPECFNGRHVPLSGSQI
VKGKLAGKRHRYRVLSSCPQAGEATLLAPSTEAGGGLTCASAPQGTLRILEGPQQSLSGSPLQPIPASPP
PQIPPGLRPRFCAFGGNPPVTGPRSALAPNLLTSGKKKKEMQVTEAPVTQEAVNGHGALEVDMALGSPEM
DVRKKKKKKNQQLKEPEAAGPVGTEPTVETLEPLGVLFPSTTKKRKKPKGKETFEPEDKTVKQEQINTEP
LEDTVLSPTKKRKRQKGTEGMEPEEGVTVESQPQVKVEPLEEAIPLPPTKKRKKEKGQMAMMEPGTEAME
PVEPEMKPLESPGGTMAPQQPEGAKPQAQAALAAPKKKTKKEKQQDATVEPETEVVGPELPDDLEPQAAP
TSTKKKKKKKERGHTVTEPIQPLEPELPGEGQPEARATPGSTKKRKKQSQESRMPETVPQEEMPGPPLNS
ESGEEAPTGRDKKRKQQQQQPV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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