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Report for CCDS75830.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75830.1 Public Homo sapiens 9 STOML2 24 110 108 CCDS HistoryNCBI Gene:30968Re-query CCDS DB by CCDS ID:75830.1Re-query CCDS DB by GeneID:30968See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75830.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619795.4 ENSP00000481672.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619795.4Link to Ensembl Protein Viewer:ENSP00000481672.1Re-query CCDS DB by Nucleotide ID:ENST00000619795Re-query CCDS DB by Protein ID:ENSP00000481672
Original member Current member NCBI NM_001287033.2 NP_001273962.1 Accepted alive Link to Nucleotide Sequence:NM_001287033.2Link to Protein Sequence:NP_001273962.1Re-query CCDS DB by Nucleotide ID:NM_001287033Re-query CCDS DB by Protein ID:NP_001273962Link to BLAST:NP_001273962.1

Chromosomal Locations for CCDS 75830.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 35100035 35100172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35100598 35100726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35100932 35101011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35101135 35101279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35101426 35101560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35101710 35101811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35101904 35101962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35102095 35102194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35103050 35103094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGCTGGCGCGCGCGGCGCGGGGCACTGGGGCCCTTTTGCTGAGGGGTTTGAACATCCTCATCCCTGTGT
TAGACCGGATCCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGAC
TCTCGACAATGTAACTCTGCAAATCGATGGAGTCCTTTACCTGCGCATCATGGACCCTTACAAGGCAAGC
TACGGTGTGGAGGACCCTGAGTATGCCGTCACCCAGCTAGCTCAAACAACCATGAGATCAGAGCTCGGCA
AACTCTCTCTGGACAAAGTCTTCCGGGAACGGGAGTCCCTGAATGCCAGCATTGTGGATGCCATCAACCA
AGCTGCTGACTGCTGGGGTATCCGCTGCCTCCGTTATGAGATCAAGGATATCCATGTGCCACCCCGGGTG
AAAGAGTCTATGCAGATGCAGGTGGAGGCAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTGAGGGGA
CCCGAGAGTCGGCCATCAATGTGGCAGAAGGGAAGAAACAGGCCCAGATCCTGGCCTCCGAAGCAGAAAA
GGCTGAACAGATAAATCAGGCAGCAGGAGAGGCCAGTGCAGTTCTGGCGAAGGCCAAGGCTAAAGCTGAA
GCTATTCGAATCCTGGCTGCAGCTCTGACACAACATAATGGAGATGCAGCAGCTTCACTGACTGTGGCCG
AGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGG
CGATGTCACCAGCATGGTGGCTCAGGCCATGGGTGTATATGGAGCCCTCACCAAAGCCCCAGTGCCAGGG
ACTCCAGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAAC
TTGATCGAGTCAAGATGAGTTAG

Translation (310 aa):
MLARAARGTGALLLRGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGVLYLRIMDPYKAS
YGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASIVDAINQAADCWGIRCLRYEIKDIHVPPRV
KESMQMQVEAERRKRATVLESEGTRESAINVAEGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAE
AIRILAAALTQHNGDAAASLTVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMVAQAMGVYGALTKAPVPG
TPDSLSSGSSRDVQGTDASLDEELDRVKMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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