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Report for CCDS43076.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43076.1 Public Homo sapiens 3 TCAIM 24 110 108 CCDS HistoryNCBI Gene:285343Re-query CCDS DB by CCDS ID:43076.1Re-query CCDS DB by GeneID:285343See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43076.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383746.7 ENSP00000373252.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383746.7Link to Ensembl Protein Viewer:ENSP00000373252.3Re-query CCDS DB by Nucleotide ID:ENST00000383746Re-query CCDS DB by Protein ID:ENSP00000373252
Original member Current member EBI ENST00000396078.7 ENSP00000379388.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396078.7Link to Ensembl Protein Viewer:ENSP00000379388.3Re-query CCDS DB by Nucleotide ID:ENST00000396078Re-query CCDS DB by Protein ID:ENSP00000379388
Original member Current member NCBI NM_001029839.3 NP_001025010.1 Accepted alive Link to Nucleotide Sequence:NM_001029839.3Link to Protein Sequence:NP_001025010.1Re-query CCDS DB by Nucleotide ID:NM_001029839Re-query CCDS DB by Protein ID:NP_001025010Link to BLAST:NP_001025010.1
Original member Current member NCBI NM_001029840.3 NP_001025011.1 Accepted alive Link to Nucleotide Sequence:NM_001029840.3Link to Protein Sequence:NP_001025011.1Re-query CCDS DB by Nucleotide ID:NM_001029840Re-query CCDS DB by Protein ID:NP_001025011Link to BLAST:NP_001025011.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025010.1 70 Q8N3R3-3 70 100% 0 0
NP_001025011.1 70 Q8N3R3-3 70 100% 0 0

Chromosomal Locations for CCDS 43076.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 44354783 44354811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44357741 44357876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44358217 44358264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (213 nt):
ATGTTTTGCCACCTGAGACCTATGAGGAGGTTATGTCTAGAGAAGATATTTCCACACTGGTTTCCCTTTT
CAAGAGCTTTATCGGGAGCTGAAGCAGTCAATGCCTTGAGGCCTTTCTATTTTGCAGTACATCCAGATTT
CTTTGGACAGCACCCCGTAGAAAGGGATGATACATGGAAGAGTTTTCAATGCCCTAGTGATTTTTCCTTA
TGA

Translation (70 aa):
MFCHLRPMRRLCLEKIFPHWFPFSRALSGAEAVNALRPFYFAVHPDFFGQHPVERDDTWKSFQCPSDFSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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