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Report for CCDS1634.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1634.2 Public Homo sapiens 1 OR2C3 24 110 108 CCDS HistoryNCBI Gene:81472Re-query CCDS DB by CCDS ID:1634.2Re-query CCDS DB by GeneID:81472See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1634.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366487.4 ENSP00000355443.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000366487.4Link to Ensembl Protein Viewer:ENSP00000355443.3Re-query CCDS DB by Nucleotide ID:ENST00000366487Re-query CCDS DB by Protein ID:ENSP00000355443
Original member Current member EBI ENST00000641802.1 ENSP00000493385.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641802.1Link to Ensembl Protein Viewer:ENSP00000493385.1Re-query CCDS DB by Nucleotide ID:ENST00000641802Re-query CCDS DB by Protein ID:ENSP00000493385
Original member Current member NCBI NM_198074.6 NP_932340.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198074.6Link to Protein Sequence:NP_932340.4Re-query CCDS DB by Nucleotide ID:NM_198074Re-query CCDS DB by Protein ID:NP_932340Link to BLAST:NP_932340.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932340.4 320 Q8N628 320 100% 0 0

Chromosomal Locations for CCDS 1634.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247531549 247532511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGATGGAAATAGCCAATGTGAGTTCTCCAGAAGTCTTTGTCCTCCTGGGCTTCTCCACACGACCCTCAC
TAGAAACTGTCCTCTTCATAGTTGTCTTGAGTTTTTACATGGTATCGATCTTGGGCAATGGCATCATCAT
TCTGGTCTCCCATACAGATGTGCACCTCCACACACCTATGTACTTCTTTCTTGCCAACCTCCCCTTCCTG
GACATGAGCTTCACCACGAGCATTGTCCCACAGCTCCTGGCTAACCTCTGGGGACCACAGAAAACCATAA
GCTATGGAGGGTGTGTGGTCCAGTTCTATATCTCCCATTGGCTGGGGGCAACCGAGTGTGTCCTGCTGGC
CACCATGTCCTATGACCGCTACGCTGCCATCTGCAGGCCACTCCATTACACTGTCATTATGCATCCACAG
CTTTGCCTTGGGCTAGCTTTGGCCTCCTGGCTGGGGGGTCTGACCACCAGCATGGTGGGCTCCACGCTCA
CCATGCTCCTACCGCTGTGTGGGAACAATTGCATCGACCACTTCTTTTGCGAGATGCCCCTCATTATGCA
ACTGGCTTGTGTGGATACCAGCCTCAATGAGATGGAGATGTACCTGGCCAGCTTTGTCTTTGTTGTCCTG
CCTCTGGGGCTCATCCTGGTCTCTTACGGCCACATTGCCCGGGCCGTGTTGAAGATCAGGTCAGCAGAAG
GGCGGAGAAAGGCATTCAACACCTGTTCTTCCCACGTGGCTGTGGTGTCTCTGTTTTACGGGAGCATCAT
CTTCATGTATCTCCAGCCAGCCAAGAGCACCTCCCATGAGCAGGGCAAGTTCATAGCTCTGTTCTACACC
GTAGTCACTCCTGCGCTGAACCCACTTATTTACACCCTGAGGAACACGGAGGTGAAGAGCGCCCTCCGGC
ACATGGTATTAGAGAACTGCTGTGGCTCTGCAGGCAAGCTGGCGCAAATTTAG

Translation (320 aa):
MMEIANVSSPEVFVLLGFSTRPSLETVLFIVVLSFYMVSILGNGIIILVSHTDVHLHTPMYFFLANLPFL
DMSFTTSIVPQLLANLWGPQKTISYGGCVVQFYISHWLGATECVLLATMSYDRYAAICRPLHYTVIMHPQ
LCLGLALASWLGGLTTSMVGSTLTMLLPLCGNNCIDHFFCEMPLIMQLACVDTSLNEMEMYLASFVFVVL
PLGLILVSYGHIARAVLKIRSAEGRRKAFNTCSSHVAVVSLFYGSIIFMYLQPAKSTSHEQGKFIALFYT
VVTPALNPLIYTLRNTEVKSALRHMVLENCCGSAGKLAQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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