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Report for CCDS12508.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12508.1 Public Homo sapiens 19 ZNF573 24 110 108 CCDS HistoryNCBI Gene:126231Re-query CCDS DB by CCDS ID:12508.1Re-query CCDS DB by GeneID:126231See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 12508.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339503.7 ENSP00000340171.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339503.7Link to Ensembl Protein Viewer:ENSP00000340171.4Re-query CCDS DB by Nucleotide ID:ENST00000339503Re-query CCDS DB by Protein ID:ENSP00000340171
Original member Current member NCBI NM_152360.4 NP_689573.3 Accepted alive Link to Nucleotide Sequence:NM_152360.4Link to Protein Sequence:NP_689573.3Re-query CCDS DB by Nucleotide ID:NM_152360Re-query CCDS DB by Protein ID:NP_689573Link to BLAST:NP_689573.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689573.3 607 Q86YE8-3 607 100% 0 0

Chromosomal Locations for CCDS 12508.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37738492 37740194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37758476 37758596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1824 nt):
ATGGAGTCTTGCTCTGTCGCACAGGCTGGAGTGCAGTGGCCCGATCTCAGCTCACTGCAACCTCCGCCTC
CCAGGTTCAAGCAATTCTCCTGCCACAGCCTCCAAGTAGCTGGGATTACAGATTTGGATTTACAGTGTGA
GATAATCAGCTACATAGAAGTACCCACTTATGAAACAGATATATCCTCTACACAACTTCAGAGCATATAT
AAGAGAGAGAAACTCTATGAATGTAAGAAATGTCAGAAGAAATTTAGTAGTGGTTATCAACTTATTCTAC
ATCACAGGTTTCATGTCATTGAGAGACCCTATGAATGCAAAGAGTGTGGGAAGAACTTTCGTAGTGGCTA
TCAACTTACTCTACATCAAAGATTTCATACTGGTGAGAAACCCTATGAATGTACAGAATGTGGGAAGAAC
TTTAGAAGTGGTTATCAGCTGACTGTGCATCAGAGATTTCATACTGGTGAGAAAACCTATGAATGTAGGC
AGTGTGGGAAGGCCTTTATATATGCCTCACACATTGTTCAACATGAGAGAATTCACACTGGTGGGAAGCC
GTATGAATGTCAGGAGTGTGGGAGGGCCTTTAGTCAAGGTGGACATCTTAGAATTCATCAGAGAGTTCAT
ACTGGCGAAAAACCATATAAATGTAAGGAATGTGGGAAGACTTTTAGTAGGCGCTCAAATCTTGTTGAAC
ATGGGCAGTTTCATACTGATGAGAAGCCATACATATGTGAGAAATGTGGAAAGGCCTTTAGAAGAGGTCA
CCAGCTTACTGTACATCAGAGAGTTCACACTGGTAAAAAGCCATATGAGTGTAAAGAATGTGGGAAGGGC
TATACCACTGCCTCATACTTTCTTCTACATCAGAGAATTCATAAAGGTGGAAAACCCTATGAATGTAAGG
AGTGTAAGAAAACCTTTACTTTGTATAGAAATCTTACTCGGCATCAGAATATTCATACTGGTGAGAAACT
TTTTGAATGCAAGCAATGTGGGAAGACCTATACTACTGGTTCAAAACTCTTTCAACATCAGAAAACTCAT
ACTGGCGAGAAACCCTATGAATGCAAGGAATGCGGAAAGGCCTTTAGCTTGTATGGCTACCTTAAACAAC
ATCAGAAAATTCATACTGGCATGAAACACTTTGAATGTAAGGAGTGTAAAAAAACCTTTACTTTGTATAG
AAATCTTACTCGACATCAGAATATTCACACTGGTAAGAAACTTTTTGAATGTCAGGAATGTGGGAAGGCC
TATAGTACTGGCTCAAACCTTATTCAACATCGGAAAACTCATACTGGTGAGAAACCCTATAAATGTAAGG
AATGTGGCAAGACCTTTAGCTTGCATGGATATCTTAATCAACATCAGAAAATTCATACTGGTATGAAACC
CTATGAATGTAAGGTATGTAGAAAAACCTTTACTTTCTATAGAAATCTTACTCTACATCAAAGTATTCAT
ACTGATGAGAAACCTTTTGAATGTAAGGAATGTGGGAAGACCTTTAGACGTAGTTCACACCTTACTGCAC
ATCAGAGCATTCATGCTGATAAAAAACCCTATGAATGTAAAGAATGTGGAAAGGCCTTTAAAATGTATGG
CTACCTTACCCAACATCAGAAAATTCATACTGGTGGAAAACCTTATGAATGTAAAGAATGTGGGAAGGCC
TTCAGTCGTGCTTCAAACCTTGTTCAACATGAGAGAATTCATACTGGTGAGAAACCCTATGTGTGTAAGC
AGTGTGGGAAAACCTTCAGATATGGTTCAGCCCTTAAAGCCCATCAGAGAATTCATAGGAGCATAAAAGT
GTAA

Translation (607 aa):
MESCSVAQAGVQWPDLSSLQPPPPRFKQFSCHSLQVAGITDLDLQCEIISYIEVPTYETDISSTQLQSIY
KREKLYECKKCQKKFSSGYQLILHHRFHVIERPYECKECGKNFRSGYQLTLHQRFHTGEKPYECTECGKN
FRSGYQLTVHQRFHTGEKTYECRQCGKAFIYASHIVQHERIHTGGKPYECQECGRAFSQGGHLRIHQRVH
TGEKPYKCKECGKTFSRRSNLVEHGQFHTDEKPYICEKCGKAFRRGHQLTVHQRVHTGKKPYECKECGKG
YTTASYFLLHQRIHKGGKPYECKECKKTFTLYRNLTRHQNIHTGEKLFECKQCGKTYTTGSKLFQHQKTH
TGEKPYECKECGKAFSLYGYLKQHQKIHTGMKHFECKECKKTFTLYRNLTRHQNIHTGKKLFECQECGKA
YSTGSNLIQHRKTHTGEKPYKCKECGKTFSLHGYLNQHQKIHTGMKPYECKVCRKTFTFYRNLTLHQSIH
TDEKPFECKECGKTFRRSSHLTAHQSIHADKKPYECKECGKAFKMYGYLTQHQKIHTGGKPYECKECGKA
FSRASNLVQHERIHTGEKPYVCKQCGKTFRYGSALKAHQRIHRSIKV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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