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Report for CCDS46065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46065.1 Public Homo sapiens 19 DPF1 24 110 108 CCDS HistoryNCBI Gene:8193Re-query CCDS DB by CCDS ID:46065.1Re-query CCDS DB by GeneID:8193See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46065.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414789.5 ENSP00000391884.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414789.5Link to Ensembl Protein Viewer:ENSP00000391884.1Re-query CCDS DB by Nucleotide ID:ENST00000414789Re-query CCDS DB by Protein ID:ENSP00000391884
Original member Current member EBI ENST00000412732.5 ENSP00000412098.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000412732.5Link to Ensembl Protein Viewer:ENSP00000412098.1Re-query CCDS DB by Nucleotide ID:ENST00000412732Re-query CCDS DB by Protein ID:ENSP00000412098
Original member Current member NCBI NM_001135156.3 NP_001128628.1 Accepted alive Link to Nucleotide Sequence:NM_001135156.3Link to Protein Sequence:NP_001128628.1Re-query CCDS DB by Nucleotide ID:NM_001135156Re-query CCDS DB by Protein ID:NP_001128628Link to BLAST:NP_001128628.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128628.1 332 Q92782-3 332 100% 0 0

Chromosomal Locations for CCDS 46065.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38212063 38212133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38212280 38212361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38213644 38213756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38216140 38216259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38216353 38216403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38217460 38217591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38217798 38217876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38218573 38218662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38218931 38219058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38222357 38222464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38222548 38222572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGGAGAAGACCCACCGCGGGCCGGGTTTGGCCCCGGGACAGATTTACACGTACCCCGCCCGCTGTTGGA
GGAAGAAACGGAGACTCAACATCCTGGAGGACCCCAGACTCAGGCCCTGCGAGTACAAGATCGACTGTGA
AGCACCCCTGAAGAAGGAGGGTGGCCTCCCGGAAGGGCCGGTCCTCGAGGCTCTACTGTGTGCAGAGACG
GGGGAGAAGAAGATTGAGCTGAAGGAGGAGGAGACCATTATGGACTGTCAGAAACAGCAGTTGCTGGAGT
TTCCGCATGACCTCGAGGTGGAAGACTTGGAGGATGACATTCCCAGGAGGAAGAACAGGGCCAAAGGAAA
GGCATATGGCATCGGGGGTCTCCGGAAACGCCAGGACACCGCTTCCCTGGAGGACCGAGACAAGCCGTAT
GTCTGTGATATCTGTGGGAAACGGTATAAGAACCGGCCGGGGCTCAGCTACCACTACACCCACACCCACC
TGGCCGAGGAGGAGGGGGAGGAGAACGCCGAACGCCACGCCCTGCCCTTCCACCGGAAAAACAACCATAA
ACAGTTTTACAAAGAATTGGCCTGGGTCCCTGAGGCACAAAGGAAACACACAGCCAAGAAGGCGCCCGAC
GGCACTGTCATCCCCAACGGCTACTGTGACTTCTGCCTGGGGGGCTCCAAGAAGACGGGGTGTCCCGAGG
ACCTCATCTCCTGTGCGGACTGTGGGCGATCAGGACACCCCTCGTGTTTACAATTCACGGTGAACATGAC
GGCAGCCGTGCGGACCTACCGCTGGCAGTGCATCGAGTGCAAATCCTGCAGCCTGTGCGGAACCTCCGAG
AACGACGACCAGCTGCTGTTTTGTGATGACTGCGATCGGGGTTACCACATGTACTGCCTGAGTCCCCCCA
TGGCGGAGCCCCCGGAAGGGAGCTGGAGCTGTCACCTCTGTCTCCGGCACCTGAAGGAAAAGGCTTCTGC
TTACATCACCCTCACCTAG

Translation (332 aa):
MEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPEGPVLEALLCAET
GEKKIELKEEETIMDCQKQQLLEFPHDLEVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPY
VCDICGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPFHRKNNHKQFYKELAWVPEAQRKHTAKKAPD
GTVIPNGYCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSE
NDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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