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Report for CCDS69056.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69056.1 Public Homo sapiens 6 MRS2 24 110 108 CCDS HistoryNCBI Gene:57380Re-query CCDS DB by CCDS ID:69056.1Re-query CCDS DB by GeneID:57380See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69056.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274747.11 ENSP00000274747.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000274747.11Link to Ensembl Protein Viewer:ENSP00000274747.8Re-query CCDS DB by Nucleotide ID:ENST00000274747Re-query CCDS DB by Protein ID:ENSP00000274747
Original member Current member NCBI NM_001286266.2 NP_001273195.1 Accepted alive Link to Nucleotide Sequence:NM_001286266.2Link to Protein Sequence:NP_001273195.1Re-query CCDS DB by Nucleotide ID:NM_001286266Re-query CCDS DB by Protein ID:NP_001273195Link to BLAST:NP_001273195.1

Chromosomal Locations for CCDS 69056.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 24403047 24403236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24405168 24405241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24412222 24412395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24415033 24415163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24416397 24416513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24418084 24418236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24418461 24418578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24422937 24423050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24423584 24423694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1182 nt):
ATGGAATGCCTGCGCAGTTTACCCTGCCTCCTGCCCCGCGCGATGAGACTTCCCCGGCGGACGCTGTGTG
CCCTGGCCTTGGACGTGACCTCTGTGGGTCCTCCCGTTGCTGCCTGCGGCCGCCGAGCCAACCTGATTGG
AAGGAGCCGAGCGGCGCAGCTTTGCGGGCCCGACCGGCTCCGCGTGGCAGGTGAAGTGCACCGGTTTAGA
ACCTCTGACGTCTCTCAAGCCACTTTAGCCAGTGTAGCCCCAGTATTTACTGTGTATTTGAAAGCTGTGA
TAACTCCAGAGTGTCTTCTGATATTAGATTATCGTAATTTAAACTTAGAGCAATGGCTGTTCCGGGAACT
CCCTTCACAGTTGTCTGGAGAGGGTCAACTCGTTACATACCCTTTACCTTTTGAGTTTAGAGCTATAGAA
GCACTCCTGCAATATTGGATCAACACCCTTCAGGGGAAACTTAGCATTTTGCAGCCACTGATCCTTGAGA
CCTTGGATGCTTTGGTGGACCCCAAACATTCTTCTGTAGACAGAAGCAAACTGCACATTTTACTACAGAA
TGGCAAAAGTCTATCAGAGTTAGAAACAGATATTAAAATTTTCAAAGAGTCAATTTTGGAGATCTTGGAT
GAGGAAGAGTTGCTAGAAGAGCTCTGTGTATCAAAATGGAGTGACCCACAAGTCTTTGAAAAGAGCAGTG
CTGGGATTGACCATGCAGAAGAGATGGAGTTGCTGTTGGAAAACTACTACCGATTGGCTGACGATCTCTC
CAATGCAGCTCGTGAGCTTAGGGTGCTGATTGATGATTCACAAAGTATTATTTTCATTAATCTGGACAGC
CACCGAAACGTGATGATGAGGTTGAATCTACAGCTGACCATGGGAACCTTCTCTCTTTCGCTCTTTGGAC
TAATGGGAGTTGCTTTTGGAATGAATTTGGAATCTTCCCTTGAAGAGGACCATAGAATTTTTTGGCTGAT
TACAGGAATTATGTTCATGGGAAGTGGCCTCATCTGGAGGCGCCTGCTTTCATTCCTTGGACGACAGCTA
GAAGCTCCATTGCCTCCTATGATGGCTTCTTTACCTAAAAAGACTCTTCTGGCAGATAGAAGCATGGAAT
TGAAAAATAGCCTCAGACTGGATGGACTTGGATCAGGAAGGAGCATCCTAACAAACCGTTAG

Translation (393 aa):
MECLRSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRANLIGRSRAAQLCGPDRLRVAGEVHRFR
TSDVSQATLASVAPVFTVYLKAVITPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTYPLPFEFRAIE
ALLQYWINTLQGKLSILQPLILETLDALVDPKHSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILD
EEELLEELCVSKWSDPQVFEKSSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSIIFINLDS
HRNVMMRLNLQLTMGTFSLSLFGLMGVAFGMNLESSLEEDHRIFWLITGIMFMGSGLIWRRLLSFLGRQL
EAPLPPMMASLPKKTLLADRSMELKNSLRLDGLGSGRSILTNR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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