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Report for CCDS46270.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46270.1 Public Homo sapiens 2 DYNC2LI1 24 110 108 CCDS HistoryNCBI Gene:51626Re-query CCDS DB by CCDS ID:46270.1Re-query CCDS DB by GeneID:51626See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46270.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406852.7 ENSP00000385738.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406852.7Link to Ensembl Protein Viewer:ENSP00000385738.3Re-query CCDS DB by Nucleotide ID:ENST00000406852Re-query CCDS DB by Protein ID:ENSP00000385738
Original member Current member NCBI NM_015522.4 NP_056337.1 Accepted alive Link to Nucleotide Sequence:NM_015522.4Link to Protein Sequence:NP_056337.1Re-query CCDS DB by Nucleotide ID:NM_015522Re-query CCDS DB by Protein ID:NP_056337Link to BLAST:NP_056337.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056337.1 201 Q8TCX1-4 201 100% 0 0

Chromosomal Locations for CCDS 46270.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 43774139 43774146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43776782 43776899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43783520 43783554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43787181 43787250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43789633 43789721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43794457 43794742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGCCCAGTGAAACTCTCTGGGAAATTGCAAAAGCTGAAGTGGAAAAAAGGGGAATTAATGGAAGTGAAG
GTGATGGAGCTGAAATTGCAGAAAAATTTGTTTTCTTCATTGGCAGTAAAAATGGGGGAAAGACTACTAT
TATTCTAAGGTGTCTTGACAGAGATGAACCACCAAAACCAACCTTAGCTTTGGAATATACATATGGAAGA
AGAGCAAAAGGGCACAACACACCAAAAGATATCGCTCACTTTTGGGAACTCGGTGGAGGAACCTCTTTAT
TGGACTTAATCAGCATACCCATCACAGGTGACACCTTACGGACGTTTTCTCTTGTTCTCGTTCTGGATCT
TTCAAAACCTAATGATCTCTGGCCCACCATGGAAAATCTCTTGCAAGCCACAAAAAGCCATGTAGACAAA
GTGATAATGAAACTGGGAAAGACAAATGCTAAAGCAGTTTCTGAAATGAGACAGAAGATCTGGAATAATA
TGCCGAAGGATCATCCTGTGAGTTGCTGTTTGGGATTATTACTGGAATCCTTAGTCCCATTTATAGTTAA
TGATAACATCACAAACAACTTCTTTAGATTTTTATGCATGACTTGA

Translation (201 aa):
MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGR
RAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDK
VIMKLGKTNAKAVSEMRQKIWNNMPKDHPVSCCLGLLLESLVPFIVNDNITNNFFRFLCMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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