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Report for CCDS82772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82772.1 Public Homo sapiens 3 WDR6 24 110 108 CCDS HistoryNCBI Gene:11180Re-query CCDS DB by CCDS ID:82772.1Re-query CCDS DB by GeneID:11180See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448293.5 ENSP00000413432.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000448293.5Link to Ensembl Protein Viewer:ENSP00000413432.1Re-query CCDS DB by Nucleotide ID:ENST00000448293Re-query CCDS DB by Protein ID:ENSP00000413432
Original member Current member NCBI NM_001320547.2 NP_001307476.1 Accepted alive Link to Nucleotide Sequence:NM_001320547.2Link to Protein Sequence:NP_001307476.1Re-query CCDS DB by Nucleotide ID:NM_001320547Re-query CCDS DB by Protein ID:NP_001307476Link to BLAST:NP_001307476.1

Chromosomal Locations for CCDS 82772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49011688 49014116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49014210 49014293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49014383 49014499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49014600 49014718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49014825 49015288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3213 nt):
ATGATAAAGCGAGTGCAGAACCTGCTTGGCCACTATCTTATCCATGGCTTCCGGGTACGGCCAGAGCCTA
ATGGAGACCTTGACTTGGAGGCCATGGTGGCTGTGTTTGGAAGCAAGGGACTCCGAGTTGTGAAAATTAG
CTGGGGACAGGGCCACTTCTGGGAGCTTTGGCGCTCTGGCCTGTGGAACATGTCTGACTGGATTTGGGAT
GCACGCTGGCTTGAGGGAAATATAGCCTTGGCCCTGGGCCACAACTCAGTGGTGCTATATGACCCTGTAG
TAGGGTGCATCCTGCAAGAGGTGCCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGATTGGAGA
CGCCTGGAAGGAGCTGACCATAGTGGCAGGTGCTGTTTCCAACCAGCTCTTGGTCTGGTACCCAGCAACT
GCCTTAGCAGACAACAAACCTGTAGCACCTGACCGACGAATCAGTGGGCATGTGGGCATCATCTTCAGCA
TGTCATACCTGGAAAGCAAGGGATTGCTGGCTACAGCTTCAGAAGACCGAAGCGTTCGTATCTGGAAGGT
GGGCGACCTGCGAGTGCCTGGGGGTCGGGTGCAGAATATTGGGCACTGCTTTGGGCACAGCGCCCGTGTG
TGGCAGGTCAAGCTTCTAGAGAATTACCTTATCAGTGCAGGAGAGGATTGTGTCTGCTTGGTGTGGAGCC
ATGAAGGTGAGATCCTCCAGGCCTTTCGGGGACACCAGGGACGTGGGATCCGGGCCATAGCTGCCCATGA
GAGGCAGGCCTGGGTGATCACTGGGGGTGATGACTCAGGCATTCGGCTGTGGCACTTGGTAGGGCGTGGG
TACCGGGGATTGGGGGTCTCGGCTCTCTGCTTCAAGTCCCGTAGTAGGCCAGGTACACTCAAGGCTGTGA
CTCTGGCTGGCTCTTGGCGACTGCTGGCAGTGACTGATACAGGGGCCCTGTATCTCTATGACGTCGAGGT
CAAGTGCTGGGAGCAGCTGCTAGAGGATAAACATTTCCAGTCCTACTGCCTGCTGGAGGCAGCTCCTGGT
CCCGAGGGCTTCGGATTGTGTGCTATGGCCAATGGGGAAGGTCGTGTCAAGGTTGTCCCCATCAACACTC
CAACTGCTGCTGTGGACCAGACCCTGTTTCCTGGGAAGGTGCACAGCTTGAGCTGGGCCCTGCGTGGTTA
TGAGGAGCTCCTGTTGCTGGCATCGGGCCCTGGCGGGGTAGTAGCTTGCCTAGAGATCTCAGCCGCACCC
TCTGGCAAGGCCATCTTTGTCAAGGAACGTTGTCGGTACCTGCTGCCCCCAAGCAAGCAGAGATGGCACA
CATGCAGTGCCTTCCTACCCCCAGGTGACTTCCTGGTGTGTGGTGACCGCCGGGGCTCTGTGCTGCTATT
CCCCTCCAGACCAGGTCTGCTCAAGGACCCTGGGGTGGGAGGCAAGGCTCGGGCTGGTGCTGGGGCACCT
GTAGTGGGTAGTGGTAGTAGTGGGGGTGGGAATGCTTTCACTGGGTTGGGCCCAGTGTCTACCCTGCCCT
CTCTGCACGGGAAGCAGGGTGTGACCTCAGTCACATGCCATGGTGGCTATGTGTATACCACAGGGCGTGA
TGGAGCCTACTACCAGCTGTTTGTACGAGACGGCCAGCTCCAGCCAGTCCTAAGGCAGAAGTCCTGTCGA
GGCATGAACTGGCTAGCTGGGCTCCGTATAGTGCCCGATGGGAGCATGGTTATCCTGGGTTTCCATGCCA
ATGAGTTTGTGGTGTGGAACCCTCGGTCACACGAGAAGCTGCACATCGTCAACTGTGGTGGAGGGCACCG
TTCGTGGGCATTCTCTGATACTGAGGCGGCCATGGCCTTTGCTTACCTCAAGGATGGGGATGTCATGCTG
TACAGGGCTCTGGGTGGCTGCACCCGGCCACACGTGATTCTCCGGGAGGGTCTGCATGGCCGTGAGATCA
CTTGTGTAAAGCGTGTGGGCACCATTACCCTGGGGCCTGAATATGGAGTGCCCAGCTTCATGCAGCCTGA
TGACCTGGAGCCTGGCAGTGAGGGGCCCGACTTGACTGACATTGTGATCACATGTAGTGAGGACACTACT
GTCTGTGTCCTAGCACTCCCTACAACCACAGGCTCAGCCCACGCACTCACAGCTGTTTGTAACCATATCT
CCTCGGTACGTGCTGTGGCTGTGTGGGGCATTGGCACCCCAGGTGGCCCTCAGGATCCTCAGCCAGGCCT
GACTGCCCATGTGGTGTCTGCGGGGGGGCGGGCTGAGATGCACTGCTTCAGCATCATGGTTACTCCGGAC
CCCAGCACCCCAAGCCGCCTCGCCTGCCATGTCATGCACCTTTCGTCCCACCGGCTAGATGAGTATTGGG
ACCGGCAACGCAATCGGCATCGGATGGTTAAGGTAGACCCAGAGACCAGGTACATGTCCCTTGCTGTGTG
TGAACTTGACCAGCCCGGCCTTGGCCCCCTTGTGGCTGCAGCCTGTAGTGATGGGGCCGTAAGGCTCTTT
CTTTTGCAGGATTCTGGGCGGATTCTGCAGCTCCTTGCTGAAACCTTCCACCATAAGCGATGTGTCCTCA
AGGTCCACTCCTTTACACACGAGGCACCCAACCAGAGGCGGAGGCTCCTCCTGTGCAGCGCAGCTACTGA
TGGCAGCCTGGCTTTCTGGGATCTCACCACCATGCTAGACCATGACTCCACTGTCCTGGAGCCTCCAGTG
GATCCTGGGCTTCCCTACCGGCTTGGCACCCCCTCCCTGACTCTCCAGGCCCACAGCTGTGGTATCAACA
GCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTGGCCAGTGGCAGTGAAGATGGATCCCTCCA
TGTCTTCGTGCTTGCTGTGGAGATGCTACAGCTAGAAGAGGCTGTGGGAGAGGCTGGGCTGGTACCCCAG
CTGCGTGTGCTAGAGGAATACTCTGTCCCCTGTGCACATGCTGCCCATGTGACAGGCCTCAAGATCCTAA
GCCCAAGCATCATGGTCTCAGCCTCCATTGATCAACGGCTGACCTTCTGGCGTCTGGGGCATGGTGAACC
CACCTTCATGAATAGCACTGTGTTCCATGTGCCTGATGTGGCTGACATGGACTGCTGGCCTGTGAGCCCT
GAGTTTGGCCACCGTTGTGCCCTTGGGGGTCAGGGGCTTGAGGTTTACAACTGGTATGACTGA

Translation (1070 aa):
MIKRVQNLLGHYLIHGFRVRPEPNGDLDLEAMVAVFGSKGLRVVKISWGQGHFWELWRSGLWNMSDWIWD
ARWLEGNIALALGHNSVVLYDPVVGCILQEVPCTDRCTLSSACLIGDAWKELTIVAGAVSNQLLVWYPAT
ALADNKPVAPDRRISGHVGIIFSMSYLESKGLLATASEDRSVRIWKVGDLRVPGGRVQNIGHCFGHSARV
WQVKLLENYLISAGEDCVCLVWSHEGEILQAFRGHQGRGIRAIAAHERQAWVITGGDDSGIRLWHLVGRG
YRGLGVSALCFKSRSRPGTLKAVTLAGSWRLLAVTDTGALYLYDVEVKCWEQLLEDKHFQSYCLLEAAPG
PEGFGLCAMANGEGRVKVVPINTPTAAVDQTLFPGKVHSLSWALRGYEELLLLASGPGGVVACLEISAAP
SGKAIFVKERCRYLLPPSKQRWHTCSAFLPPGDFLVCGDRRGSVLLFPSRPGLLKDPGVGGKARAGAGAP
VVGSGSSGGGNAFTGLGPVSTLPSLHGKQGVTSVTCHGGYVYTTGRDGAYYQLFVRDGQLQPVLRQKSCR
GMNWLAGLRIVPDGSMVILGFHANEFVVWNPRSHEKLHIVNCGGGHRSWAFSDTEAAMAFAYLKDGDVML
YRALGGCTRPHVILREGLHGREITCVKRVGTITLGPEYGVPSFMQPDDLEPGSEGPDLTDIVITCSEDTT
VCVLALPTTTGSAHALTAVCNHISSVRAVAVWGIGTPGGPQDPQPGLTAHVVSAGGRAEMHCFSIMVTPD
PSTPSRLACHVMHLSSHRLDEYWDRQRNRHRMVKVDPETRYMSLAVCELDQPGLGPLVAAACSDGAVRLF
LLQDSGRILQLLAETFHHKRCVLKVHSFTHEAPNQRRRLLLCSAATDGSLAFWDLTTMLDHDSTVLEPPV
DPGLPYRLGTPSLTLQAHSCGINSLHTLPTREGHHLVASGSEDGSLHVFVLAVEMLQLEEAVGEAGLVPQ
LRVLEEYSVPCAHAAHVTGLKILSPSIMVSASIDQRLTFWRLGHGEPTFMNSTVFHVPDVADMDCWPVSP
EFGHRCALGGQGLEVYNWYD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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