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Report for CCDS94039.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94039.1 Public Homo sapiens 6 WDR27 24 110 108 CCDS HistoryNCBI Gene:253769Re-query CCDS DB by CCDS ID:94039.1Re-query CCDS DB by GeneID:253769See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94039.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000647873.1 ENSP00000497692.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647873.1Link to Ensembl Protein Viewer:ENSP00000497692.1Re-query CCDS DB by Nucleotide ID:ENST00000647873Re-query CCDS DB by Protein ID:ENSP00000497692
Original member Current member NCBI NM_001350624.2 NP_001337553.1 Accepted alive Link to Nucleotide Sequence:NM_001350624.2Link to Protein Sequence:NP_001337553.1Re-query CCDS DB by Nucleotide ID:NM_001350624Re-query CCDS DB by Protein ID:NP_001337553Link to BLAST:NP_001337553.1
Original member Current member NCBI NM_001350625.2 NP_001337554.1 Accepted alive Link to Nucleotide Sequence:NM_001350625.2Link to Protein Sequence:NP_001337554.1Re-query CCDS DB by Nucleotide ID:NM_001350625Re-query CCDS DB by Protein ID:NP_001337554Link to BLAST:NP_001337554.1

Chromosomal Locations for CCDS 94039.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 169657931 169658046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169658276 169658358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169659086 169659207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169659451 169659518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169660663 169660766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169662304 169662424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169664166 169664286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169665486 169665556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169667136 169667187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169670569 169670693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169672255 169672396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 169688817 169689005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1314 nt):
ATGGAAAATCCCCAAGACATTTTCTCAAGTAATGGTGGCTGTCTAAGTGATATAGTTATAGAAAAATACC
TGGTTGAATCCAAGGAGTCTGTGTCTCATGTTCAGCTTGCTTGCAGCATGCAGGACTGTGCTTTCCCTTT
GGATGGAACTGAACTTTGTATATGGAACACTAAGGATCCTTCTCATCAGCTTCTAATCCTACGAGGACAC
CATCAGCCAATTACTGCTATGGCTTTTGGAAATAAAGTGAACCCACTTCTAATCTGCTCAGCATCACTGG
ATTATGTTATAATGTGGAACCTGGATGAATGTAGAGAGAAAGTACTTCAAGGGCTGGTCCCTCGAGGGAC
TGTCATGGGCTCGCTTTTGGGAAAGGTGCTGTGTTTACAGTTGAGCCTGGATGATCATGTTGTTGCCGTG
TGTGCTGGAAACAAAATATTCATGCTGGATATTGAGGTCTGGGACCATTGTACAGGATCATTAATATACA
GTTCATCTGTGTTATCAGCATATCCTCTTCTCAGTTTATTCATTGATGCAGAAAGCAGGCAGCTGGTCAC
CGGGTGTGCTGACGGCCAGCTTTGGATCTTCAGTTTGATGGATGGACACCATTATCGTCGTGTGGCACGG
GTTGACCTAAGGAAGAAGACAGAGACTTTCTCCACAAGAAGGGTTAAGTCTGGGCTGTGCAGCCAGCCAG
AAGAAAGCCAGCTTCCCTCTACAAGTGCTCTGGGAAAAGGAGAGCAGGTTGAAGTAACATTTCCTGTACT
GAGACTTGCACCCTGTGATCTCTCACTCATCCCAAATTCTGCATGTGGATGTCTTTCTTCTGAGAACACC
CGATGTGTGTGGATCGGAAGCTCAGTGGGCTTATTCGTATTTAACCTGGCAAACCTGGAAGTGGAAGCTG
CTTTGTATTACAAGGATTTCCAGAGCCTCAGCATCCTGCTGGCCGGATCGTGTGCCCTGAGGAACCGCAC
TGCGGATCAAAAGGTGCTGTGCTTGCTGGCCTCCCTCTTTGGCGGGAAGATTGCCGTGTTGGAGATCAAC
CCGGCCGCGCTAGTCAGGGCTCAGCAGTGCCCCAGCATGGGGCAGAGCCTCTCGGTGCCAGCCAGCTCCT
GTGTCCTACCGACCTCTCCACTGTATCTGGGAATTGCCAAGGAGAAGAGTACCAAGGCTGCTAGTGAACA
GCGACGTGCAACGTGCCCAAGACTGACCGCTGTTCCTCTGGTGCCTGTTGCAGTGGGGGTGCAGAGTGGA
CCTTCAGCAATTACTGATTGTGAGAACATTTTTTTCCCCTTTTTTCTCTGCTGA

Translation (437 aa):
MENPQDIFSSNGGCLSDIVIEKYLVESKESVSHVQLACSMQDCAFPLDGTELCIWNTKDPSHQLLILRGH
HQPITAMAFGNKVNPLLICSASLDYVIMWNLDECREKVLQGLVPRGTVMGSLLGKVLCLQLSLDDHVVAV
CAGNKIFMLDIEVWDHCTGSLIYSSSVLSAYPLLSLFIDAESRQLVTGCADGQLWIFSLMDGHHYRRVAR
VDLRKKTETFSTRRVKSGLCSQPEESQLPSTSALGKGEQVEVTFPVLRLAPCDLSLIPNSACGCLSSENT
RCVWIGSSVGLFVFNLANLEVEAALYYKDFQSLSILLAGSCALRNRTADQKVLCLLASLFGGKIAVLEIN
PAALVRAQQCPSMGQSLSVPASSCVLPTSPLYLGIAKEKSTKAASEQRRATCPRLTAVPLVPVAVGVQSG
PSAITDCENIFFPFFLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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