NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33036.1 Public Homo sapiens 19 PRR19 24 110 108 CCDS HistoryNCBI Gene:284338Re-query CCDS DB by CCDS ID:33036.1Re-query CCDS DB by GeneID:284338See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341747.8 ENSP00000342709.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341747.8Link to Ensembl Protein Viewer:ENSP00000342709.3Re-query CCDS DB by Nucleotide ID:ENST00000341747Re-query CCDS DB by Protein ID:ENSP00000342709
Original member Current member EBI ENST00000499536.2 ENSP00000445247.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000499536.2Link to Ensembl Protein Viewer:ENSP00000445247.1Re-query CCDS DB by Nucleotide ID:ENST00000499536Re-query CCDS DB by Protein ID:ENSP00000445247
Original member Current member EBI ENST00000595750.2 ENSP00000469298.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595750.2Link to Ensembl Protein Viewer:ENSP00000469298.2Re-query CCDS DB by Nucleotide ID:ENST00000595750Re-query CCDS DB by Protein ID:ENSP00000469298
Original member Current member NCBI NM_199285.3 NP_954979.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199285.3Link to Protein Sequence:NP_954979.2Re-query CCDS DB by Nucleotide ID:NM_199285Re-query CCDS DB by Protein ID:NP_954979Link to BLAST:NP_954979.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954979.2 356 A6NJB7-1 356 100% 0 0

Chromosomal Locations for CCDS 33036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 42309585 42310185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42310271 42310740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1071 nt):
ATGGATACCCAGGGACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACCTGGTCGTGTCCGTCGTCGGA
AGACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGT
GGCCATTCGGGATCCACCTGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGC
CGGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGATGTTGCAAGGCTGCTTAGCAGTGGGA
CCCTGGTGCCAGGCAGCCCCACACTCCCCGCCAAGCCCTCCCCAAGCCCAGGCAGGGCCCAGGAACCAGC
CCCACGGTCCAGGGACAAAGAGAACCAGGTGCCTGGAGGTTCGGGCCCAGGCCCACCCAGTTCCCCAGAG
TTGTCTGGCGTGGGGCAGCTGCTGGCAGAGCTGCAGTGTCAGCTGAGTTTGCCACAGGCCTTCCCCCGGA
GGAACCTGATTCAGGATGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTGTCATGGTTGTGTGCCTGA
CCTTGCCCTGGTGCTTCGGGGCTGCCAGCCACCCTTGCCAGGGGCCAAGCCTGGGGTCTCTGAGAGAAAG
ATGACACCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAGCAACAAGGGA
CAAAGGAGTTCACCTTCCCCATGCCCTACACCTCCAGCATGCCCACTGCGCACAGGGGGAGTCTGGCACC
GCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGGTCCCCCA
ACAGCGTTTGACTTGTTAAAAAGCATCTGGCTGGTAGCCACGCCACCCCCTCCTCGGCCCTGGGGGGTTG
GCCTCCCTCAGCCCCTGCCTCAGCCTTCATCACCCCTGTTGCCCCGAACCTCTGTCCTGGACTGGAGCCC
CAGCCCCCCTTCCCCACTGCCCAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTTT
CCACCCATGAGACTGTACTGA

Translation (356 aa):
MDTQGPVSQPFQQPEKPGRVRRRKTRRERNKALVGSRRPLAHHDPPVAIRDPPVVPTASKLVVITQGRLS
REHRGLFNHEVKSLDVARLLSSGTLVPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGPGPPSSPE
LSGVGQLLAELQCQLSLPQAFPRRNLIQDARDAIVHTLQACHGCVPDLALVLRGCQPPLPGAKPGVSERK
MTPFWINSPDQVPEQERQRKQQGTKEFTFPMPYTSSMPTAHRGSLAPPRGPWPPYFPSLSSPSGTAWGPP
TAFDLLKSIWLVATPPPPRPWGVGLPQPLPQPSSPLLPRTSVLDWSPSPPSPLPSLSWVVAQSSPEAWSF
PPMRLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH