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Report for CCDS74388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74388.1 Public Homo sapiens 19 ZNF227 24 110 108 CCDS HistoryNCBI Gene:7770Re-query CCDS DB by CCDS ID:74388.1Re-query CCDS DB by GeneID:7770See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391961.6 ENSP00000375823.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391961.6Link to Ensembl Protein Viewer:ENSP00000375823.2Re-query CCDS DB by Nucleotide ID:ENST00000391961Re-query CCDS DB by Protein ID:ENSP00000375823
Original member Current member EBI ENST00000589005.5 ENSP00000467577.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589005.5Link to Ensembl Protein Viewer:ENSP00000467577.1Re-query CCDS DB by Nucleotide ID:ENST00000589005Re-query CCDS DB by Protein ID:ENSP00000467577
Original member Current member NCBI NM_001289167.2 NP_001276096.1 Accepted alive Link to Nucleotide Sequence:NM_001289167.2Link to Protein Sequence:NP_001276096.1Re-query CCDS DB by Nucleotide ID:NM_001289167Re-query CCDS DB by Protein ID:NP_001276096Link to BLAST:NP_001276096.1
Original member Current member NCBI NM_001289168.2 NP_001276097.1 Accepted alive Link to Nucleotide Sequence:NM_001289168.2Link to Protein Sequence:NP_001276097.1Re-query CCDS DB by Nucleotide ID:NM_001289168Re-query CCDS DB by Protein ID:NP_001276097Link to BLAST:NP_001276097.1
Original member Current member NCBI NM_001289169.2 NP_001276098.1 Accepted alive Link to Nucleotide Sequence:NM_001289169.2Link to Protein Sequence:NP_001276098.1Re-query CCDS DB by Nucleotide ID:NM_001289169Re-query CCDS DB by Protein ID:NP_001276098Link to BLAST:NP_001276098.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276096.1 748 Q86WZ6-2 748 100% 0 0
NP_001276097.1 748 Q86WZ6-2 748 100% 0 0
NP_001276098.1 748 Q86WZ6-2 748 100% 0 0

Chromosomal Locations for CCDS 74388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44228539 44228572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44229733 44229816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44234702 44236830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2247 nt):
ATGGTGGAGAACTTCAAGAACCTGGTTGCAGTGGGGCATCTTCCCTTCCAACCAGATATGGTATCCCAAT
TGGAAGCAGAAGAAAAGCTTTGGATGATGGAAACAGAAACCCAAAGAAGCAGCAAGCATCAAAATAAGAT
GGAAACACTCCAAAAATTTGCATTAAAATACCTTTCAAATCAAGAGCTGTCCTGCTGGCAAATCTGGAAA
CAGGTTGCAAGTGAATTAACCAGGTGTCTTCAGGGGAAGAGTTCCCAGTTATTACAAGGTGACTCTATTC
AGGTTTCTGAAAATGAGAACAATATAATGAACCCTAAAGGAGATAGCTCTATTTATATTGAAAATCAAGA
GTTTCCATTTTGGAGAACCCAGCATTCTTGCGGGAATACATATCTGAGTGAGTCACAGATTCAGAGTAGA
GGTAAGCAAATTGATGTGAAAAATAACCTGCAAATACATGAAGACTTCATGAAGAAATCACCATTTCATG
AGCATATTAAAACTGACACAGAACCAAAACCCTGCAAAGGTAATGAATATGGCAAAATCATTAGTGATGG
CTCCAATCAGAAATTACCCTTAGGAGAGAAACCCCATCCATGTGGTGAGTGTGGAAGGGGCTTCAGTTAT
AGCCCAAGGCTTCCCCTTCATCCGAATGTTCATACAGGAGAAAAATGCTTCAGTCAAAGCTCACATCTGC
GAACTCATCAGAGAATTCACCCAGGAGAGAAACTCAATAGATGTCATGAATCTGGTGATTGCTTCAATAA
GAGCTCTTTTCATTCTTATCAATCTAATCATACAGGAGAGAAGTCTTATAGATGCGACAGTTGCGGCAAG
GGATTCAGTAGCAGCACGGGTCTTATCATTCATTACAGAACTCATACTGGAGAGAAACCCTATAAATGCG
AGGAATGTGGTAAATGCTTTAGTCAAAGTTCAAATTTTCAGTGCCATCAGAGAGTCCACACTGAAGAAAA
ACCATACAAATGCGAAGAGTGTGGTAAGGGCTTCGGTTGGAGTGTTAATCTCCGTGTTCACCAGAGGGTC
CACAGGGGTGAGAAGCCCTATAAATGTGAGGAATGTGGTAAGGGCTTCACTCAGGCTGCACATTTTCACA
TCCATCAGAGAGTCCACACTGGAGAGAAACCCTACAAGTGTGATGTGTGTGGTAAGGGCTTCAGCCACAA
TTCACCATTAATATGCCATCGGAGAGTCCACACAGGAGAGAAGCCATACAAGTGTGAGGCGTGTGGGAAA
GGCTTTACCCGTAATACAGATCTGCATATTCATTTCAGAGTTCACACGGGAGAGAAACCCTATAAATGTA
AGGAGTGTGGTAAGGGCTTCAGTCAGGCTTCAAATCTTCAAGTCCATCAGAATGTCCACACTGGGGAGAA
ACGATTCAAGTGTGAAACGTGTGGGAAGGGCTTCAGTCAGTCCTCAAAGCTTCAAACCCATCAGCGAGTC
CACACTGGAGAGAAACCATATAGATGTGATGTGTGTGGTAAGGACTTCAGTTATAGTTCAAATCTTAAAC
TACACCAAGTAATTCACACTGGAGAAAAACCATATAAATGTGAGGAATGTGGGAAGGGCTTCAGTTGGAG
ATCAAATCTTCATGCACATCAAAGAGTTCACTCAGGAGAAAAACCCTATAAATGTGAGCAGTGTGATAAG
AGCTTCAGTCAGGCCATAGATTTTCGGGTACATCAGAGAGTCCATACTGGAGAGAAGCCATACAAATGTG
GTGTCTGTGGTAAGGGCTTCAGTCAGTCCTCTGGTCTTCAATCCCATCAGAGAGTCCACACGGGGGAAAA
GCCATACAAATGTGATGTGTGTGGAAAGGGCTTTAGATACAGTTCGCAGTTTATATACCATCAGAGAGGC
CACACTGGAGAAAAACCTTACAAATGTGAAGAGTGTGGGAAAGGCTTTGGTAGGAGCTTGAATCTTCGCC
ATCATCAGAGGGTCCACACGGGAGAGAAACCCCATATATGTGAGGAGTGTGGTAAGGCCTTCAGTCTCCC
CTCAAATCTTCGAGTCCACCTGGGTGTTCACACCAGGGAAAAACTCTTTAAATGTGAAGAGTGTGGTAAA
GGCTTCAGTCAGAGTGCACGTCTTGAAGCCCATCAGAGAGTCCACACTGGAGAAAAACCATACAAATGTG
ACATATGTGATAAGGACTTCCGTCACCGTTCACGTCTTACATATCATCAGAAAGTCCATACTGGTAAAAA
GCTTTAG

Translation (748 aa):
MVENFKNLVAVGHLPFQPDMVSQLEAEEKLWMMETETQRSSKHQNKMETLQKFALKYLSNQELSCWQIWK
QVASELTRCLQGKSSQLLQGDSIQVSENENNIMNPKGDSSIYIENQEFPFWRTQHSCGNTYLSESQIQSR
GKQIDVKNNLQIHEDFMKKSPFHEHIKTDTEPKPCKGNEYGKIISDGSNQKLPLGEKPHPCGECGRGFSY
SPRLPLHPNVHTGEKCFSQSSHLRTHQRIHPGEKLNRCHESGDCFNKSSFHSYQSNHTGEKSYRCDSCGK
GFSSSTGLIIHYRTHTGEKPYKCEECGKCFSQSSNFQCHQRVHTEEKPYKCEECGKGFGWSVNLRVHQRV
HRGEKPYKCEECGKGFTQAAHFHIHQRVHTGEKPYKCDVCGKGFSHNSPLICHRRVHTGEKPYKCEACGK
GFTRNTDLHIHFRVHTGEKPYKCKECGKGFSQASNLQVHQNVHTGEKRFKCETCGKGFSQSSKLQTHQRV
HTGEKPYRCDVCGKDFSYSSNLKLHQVIHTGEKPYKCEECGKGFSWRSNLHAHQRVHSGEKPYKCEQCDK
SFSQAIDFRVHQRVHTGEKPYKCGVCGKGFSQSSGLQSHQRVHTGEKPYKCDVCGKGFRYSSQFIYHQRG
HTGEKPYKCEECGKGFGRSLNLRHHQRVHTGEKPHICEECGKAFSLPSNLRVHLGVHTREKLFKCEECGK
GFSQSARLEAHQRVHTGEKPYKCDICDKDFRHRSRLTYHQKVHTGKKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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