NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92188.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92188.1 Public Homo sapiens 16 DERPC 24 110 108 CCDS HistoryNCBI Gene:113455421Re-query CCDS DB by CCDS ID:92188.1Re-query CCDS DB by GeneID:113455421See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92188.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306585.9 ENSP00000305687.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000306585.9Link to Ensembl Protein Viewer:ENSP00000305687.6Re-query CCDS DB by Nucleotide ID:ENST00000306585Re-query CCDS DB by Protein ID:ENSP00000305687
Original member Current member EBI ENST00000519520.7 ENSP00000427718.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000519520.7Link to Ensembl Protein Viewer:ENSP00000427718.2Re-query CCDS DB by Nucleotide ID:ENST00000519520Re-query CCDS DB by Protein ID:ENSP00000427718
Original member Current member NCBI NM_001002847.4 NP_001002847.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002847.4Link to Protein Sequence:NP_001002847.1Re-query CCDS DB by Nucleotide ID:NM_001002847Re-query CCDS DB by Protein ID:NP_001002847Link to BLAST:NP_001002847.1
Original member Current member NCBI NM_001040144.3 NP_001035234.2 Accepted alive Link to Nucleotide Sequence:NM_001040144.3Link to Protein Sequence:NP_001035234.2Re-query CCDS DB by Nucleotide ID:NM_001040144Re-query CCDS DB by Protein ID:NP_001035234Link to BLAST:NP_001035234.2
Original member Current member NCBI NM_001366603.2 NP_001353532.1 Accepted alive Link to Nucleotide Sequence:NM_001366603.2Link to Protein Sequence:NP_001353532.1Re-query CCDS DB by Nucleotide ID:NM_001366603Re-query CCDS DB by Protein ID:NP_001353532Link to BLAST:NP_001353532.1
Original member Current member NCBI NM_001366604.2 NP_001353533.1 Accepted alive Link to Nucleotide Sequence:NM_001366604.2Link to Protein Sequence:NP_001353533.1Re-query CCDS DB by Nucleotide ID:NM_001366604Re-query CCDS DB by Protein ID:NP_001353533Link to BLAST:NP_001353533.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002847.1 524 P0CG12 524 100% 0 0
NP_001035234.2 524 P0CG12 524 100% 0 0
NP_001353532.1 524 P0CG12 524 100% 0 0
NP_001353533.1 524 P0CG12 524 100% 0 0

Chromosomal Locations for CCDS 92188.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 69118854 69120428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGAAAGAACCTCGGATTTTCCCTAGAGAGCGGCCAACTCCTTGGACTCGTGCTCCGCTGCCACCTCGAG
GACGGCTCGACGGTTCCCTGGGACCACAGGGGGGTCCTGTTCTGAACACAGGCCACCCACTGGGTGTGAA
CTCGGATCCCTTCCTTATGGCGGCCGGTTCTCTTGGTGGAAATCTGACCCCATTTCCAAGGAACCCATCT
CCTTTTCCAGCTTCATCAGGCTCATTGGCTTCAAATCCAGCACCTTTCCCGGCTGGTGCTCGTGACCCAA
GTATGGCTTCTTTTCCAAGAGGGATGAATCCCACTGGCACAGGTGCAGTTTCTTTCCCAAGGCCTGGTGG
CCTCTTGGGGCCAGGCCCAGGCCCAGGCCCCACCCTAAACCCTAGGACAGGGGCTCTGCCAGGCCCAGGG
CCTCTGTCTAACCCCAGGTTAGGGGGTCTCCCAGGACCAGGTCCTATGTCCAACCCAAGGGCAGGTGGTC
TCCTGGGAGCAGGTCCTGACCCCAGAGGTGGTGGTCCCATGGGCCCTGGATCTGGACCTAACCTGAGAGC
CGGTGTTCTGTTAACCTCTGGGAATGGTCCTCCCAATCCTAGGCCAGTTGGCCTGGGCCCAGGACCAAAC
CCCAATCTGAGATCAGGCTTTTTAGGGACAAACCCTGCCCCCAGGTCAGGTGTGTTTCCAGGCCCAGGCC
TTGGGCCCAACCCAAGACCAAGTGGCCTGGGCCCAGGCCCTAATCTAGATGCCAGAGCAGGTGGCCTCTT
GGGCACAGGATCTGGTCTTAACTTAAGAATGGCTGGACCTCAAGGCCTCGATCTTGCCCCCATTCTAAGA
GCAGCAGGTCTTTTAGGAGCAAATTCAGCTTCTTTCTCACAGGCTTCTGGAAACATGGGCACAAGCCCAT
CCTCCATGGCAAGAGTACCTGGCCCCATGGGCCCAAACTCGGGTCCTAGCTCTCGGGGAATTGGCCTTCC
AGGGCCAAATCCATCTCCCATGTCAAGGGCTCCTGGCCCCATAGGCCCTAATTCAGCTCATTTCTCAAGG
CCAGTTGGCCCCATGGGGGTAAATGCCAATCCCTTTCCCAGGGGAGCAGGTTCATCTGCCTTTTCTCAGT
CTTCTGGCACATTGGCATCAAACCCAGCTACCTTCCAAAGGTCCGCTGGCCTCCAGGGCTCAAATCCAAC
CATTTTCCCAAGAGCCTCTGGGCCACTTGGCCCCAACCCAGCTAACTTCCCAAGGGCCACTGGCCTGCAG
GGTCCAAGTCCAACTACCTTCCCAAGGTCTACTGGCCCATTAGGCCCTGGTCAAGTTACTTTCCCCAGGC
CAGCTGCCGGGCATCTGGGCCCTTCTCCAGCTGGCCCTGTGGGTATCAACCCAGCTCCTTTCACAAGGCC
AACTGGGACCCTGGGTCTCAACCCAGCTTCCTTTCCAAGGATGAATGGCCCTGCAGGCAAGAGTTTCGTC
CCATTTCCTAGAGTGGGGAGCCTCCCTGGCACAAACCCAGCTGCTTTCCCCAGACCAGGGGGTCCAATGG
CTGCAATGTACCCAAATGGAATGTTGCCCCCTTAA

Translation (524 aa):
MKEPRIFPRERPTPWTRAPLPPRGRLDGSLGPQGGPVLNTGHPLGVNSDPFLMAAGSLGGNLTPFPRNPS
PFPASSGSLASNPAPFPAGARDPSMASFPRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALPGPG
PLSNPRLGGLPGPGPMSNPRAGGLLGAGPDPRGGGPMGPGSGPNLRAGVLLTSGNGPPNPRPVGLGPGPN
PNLRSGFLGTNPAPRSGVFPGPGLGPNPRPSGLGPGPNLDARAGGLLGTGSGLNLRMAGPQGLDLAPILR
AAGLLGANSASFSQASGNMGTSPSSMARVPGPMGPNSGPSSRGIGLPGPNPSPMSRAPGPIGPNSAHFSR
PVGPMGVNANPFPRGAGSSAFSQSSGTLASNPATFQRSAGLQGSNPTIFPRASGPLGPNPANFPRATGLQ
GPSPTTFPRSTGPLGPGQVTFPRPAAGHLGPSPAGPVGINPAPFTRPTGTLGLNPASFPRMNGPAGKSFV
PFPRVGSLPGTNPAAFPRPGGPMAAMYPNGMLPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH