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Report for CCDS82898.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82898.1 Public Homo sapiens 3 IQCG 24 110 108 CCDS HistoryNCBI Gene:84223Re-query CCDS DB by CCDS ID:82898.1Re-query CCDS DB by GeneID:84223See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82898.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453254.5 ENSP00000389897.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453254.5Link to Ensembl Protein Viewer:ENSP00000389897.1Re-query CCDS DB by Nucleotide ID:ENST00000453254Re-query CCDS DB by Protein ID:ENSP00000389897
Original member Current member NCBI NM_001323030.2 NP_001309959.1 Accepted alive Link to Nucleotide Sequence:NM_001323030.2Link to Protein Sequence:NP_001309959.1Re-query CCDS DB by Nucleotide ID:NM_001323030Re-query CCDS DB by Protein ID:NP_001309959Link to BLAST:NP_001309959.1

Chromosomal Locations for CCDS 82898.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 197913836 197914042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197926024 197926105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197932174 197932302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197938548 197938780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197943778 197944051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197945620 197945627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGAAGAAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAAGTTTGGCATTCTGAGATGACGGTGTCAG
TGACAGGCGAACCACCTAGTACCGTAGAAGAAGAAGGAATACCTAAAGAAACAGACATAGAAATCATCCC
AGAAATCCCGGAAACTCTAGAGCCACTGTCCCTTCCAGATGTGCTGAGGATCTCGGCAGTTCTGGAGGAC
ACCACAGACCAGCTCTCTATTCTGAACTACATCATGCCCGTTCAGTACGAAGGGAGACAGAGCATCTGCG
TGAAAAGCAGAGAAATGAATCTAGAAGGAACGAATCTAGACAAACTTCCAATGGCCTCAACAATCACAAA
AATACCCAGTCCGTTAATAACTGAGGAAGGACCCAACTTGCCAGAAATCAGACACAGAGGCCGGTTCGCT
GTGGAGTTTAACAAAATGCAGGATCTTGTCTTCAAAAAACCTACAAGGCAGACCATCATGACTACGGAGA
CACTGAAGAAAATTCAGATTGATAGGCAGTTTTTCAGCGATGTGATTGCAGATACCATTAAGGAGTTGCA
AGATTCGGCCACTTACAACAGTCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACAAAATGCATTTCTAT
GACATCATTGCCAGGGAGGAAAAAGGAAGAAAACAGATAATATCACTTCAAAAACAGCTAATTAATGTCA
AAAAGGAATGGCAATTTGAAGTCCAGAGTCAGAATGAGTATATTGCTAACCTCAAGGACCAACTGCAAGA
GATGAAGGCAAAATCCAACTTGGAGAATCGCTACATGAAAACCAATACCGAGCTGCAGATTGCCCAGACC
CAGAAAAAGTGTAACAGAACAGAGGAACTCTTGGTGGAAGAGATTGAGGTAATCCCTGGGACATTAGCCA
AGAACCCAGGAGATGGCAATTGA

Translation (310 aa):
MEEDSLEDSNLPPKVWHSEMTVSVTGEPPSTVEEEGIPKETDIEIIPEIPETLEPLSLPDVLRISAVLED
TTDQLSILNYIMPVQYEGRQSICVKSREMNLEGTNLDKLPMASTITKIPSPLITEEGPNLPEIRHRGRFA
VEFNKMQDLVFKKPTRQTIMTTETLKKIQIDRQFFSDVIADTIKELQDSATYNSLLQALSKERENKMHFY
DIIAREEKGRKQIISLQKQLINVKKEWQFEVQSQNEYIANLKDQLQEMKAKSNLENRYMKTNTELQIAQT
QKKCNRTEELLVEEIEVIPGTLAKNPGDGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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