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Report for CCDS19459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19459.1 Public Mus musculus 5 Prkg2 23 108 98 CCDS HistoryNCBI Gene:19092Re-query CCDS DB by CCDS ID:19459.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19459.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000161490.7 ENSMUSP00000124963.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161490.7Link to Ensembl Protein Viewer:ENSMUSP00000124963.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161490Re-query CCDS DB by Protein ID:ENSMUSP00000124963
Original member Current member NCBI NM_008926.4 NP_032952.3 Accepted alive Link to Nucleotide Sequence:NM_008926.4Link to Protein Sequence:NP_032952.3Re-query CCDS DB by Nucleotide ID:NM_008926Re-query CCDS DB by Protein ID:NP_032952Link to BLAST:NP_032952.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032952.3 762 Q61410 762 99.2126% 0 6

Chromosomal Locations for CCDS 19459.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 98932010 98932105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98934329 98934395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98942154 98942216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98943414 98943536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98947371 98947534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98966512 98966653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98967727 98967816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98969937 98970073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98971852 98972005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98973108 98973206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98976436 98976504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98979766 98979860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98981086 98981163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98988287 98988350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98992317 98992422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98994532 98994645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 98997346 98997512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 99024394 99024854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2289 nt):
ATGGGAAATGGTTCAGTGAAGCCCAAGCATGCTAAGCACCCAGATGGCCATTCAGGGAACCTCAGCAATG
AAGCCCTGCGGAGCAAGGTGTTGGAGCTGGAGCGGGAGCTGAGGAGGAAGGACGCGGAACTTCAGGAACG
GGAGTACCACCTGAAGGAGCTTCGGGAGCAGCTGGCCAAGCAGACCGTGGCCATCGCAGAGCTCACAGAA
GAACTGCAGAGCAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGATCCACGTGCAGGGAGGAAGCCCAC
TGCAGGCCTCTCCCGACAAAGTGCCTCTGGATGTTCACCGCAAGACCTCAGGCTTGGTCTCGCTCCACAG
CAGGAGGGGGGCGAAGGCTGGAGTGTCTGCAGAGCCAACCACCCGAACCTATGACCTCAACAAACCCCCC
GAGTTTTCCTTTGAGAAAGCGAGAGTCAGGAAGGATTCCAGTGAGAAAAAGCTCATCACAGATGCCCTGA
ATAAGAACCAGTTTCTGAAGAGATTGGATCCCCAGCAGATCAAGGACATGGTGGAATGCATGTACGGGAG
AAACTATCAACAGGGCAGCTACGTCATTAAGCAGGGGGAACCAGGCAACCATATCTTTGTGCTGGCCGAG
GGTAGACTTGAGGTGTTCCAGGGAGAGAAGTTGCTATCATCCATCCCAATGTGGACCACGTTTGGGGAAC
TGGCTATTTTGTACAACTGTACTCGGACTGCCTCAGTGAAAGCGATTACCAATGTTAAAACTTGGGCCCT
CGATAGAGAGGTTTTCCAGAACATTATGAGGAGAACAGCCCAAGCCCGGGATGAGGAGTACAGAAACTTC
CTCAGAAGTGTCTCCTTGTTGAAGAATTTACCTGAAGACAAACTAACCAAGATCATTGACTGCTTGGAAG
TGGAATACTATGACAAAGGAGATTACATCATCAGAGAAGGAGAAGAAGGGAGCACCTTTTTCATTTTGGC
AAAAGGCAAGGTGAAAGTCACACAGAGCACAGAGGGCCATGATCAGCCACAGTTGATCAAGACACTGCAG
AAAGGAGAGTACTTTGGAGAAAAGGCTCTGATCAGTGATGACGTCAGATCAGCCAATATAATTGCGGAAG
AAAATGATGTCGCATGCCTCGTGATAGATCGAGAAACATTCAACCAAACTGTCGGGACATTTGATGAACT
CCAAAAATATCTTGAGGGGTATGTGGCCACCCTGAACCGTGACGATGAAAAAAGACACGCAAAGCGCTCC
ATGTCTAGCTGGAAGCTGTCCAAAGCCCTTTCTCTGGAGATGATTCAGCTGAAAGAGAAGGTGGCCCGAT
TCTCCTCAACCTCCCCATTCCAGAACCTCGAGATTATCGCAACACTGGGCGTTGGTGGGTTCGGAAGAGT
GGAGCTTGTTAAAGTGAAAAATGAGAATGTTGCTTTTGCCATGAAGTGTATAAGGAAGAAGCACATTGTT
GATACAAAGCAGCAAGAACATGTCTACTCAGAAAAGAGGATCCTGGAAGAGCTGTGTTCTCCCTTCATCG
TGAAGTTGTATCGTACTTTCAAGGACAATAAATATGTATACATGCTTCTGGAGGCCTGCTTAGGTGGGGA
GCTGTGGAGTATACTGAGGGACAGAGGCAGCTTCGATGAACCCACCTCCAAATTCTGTGTCGCTTGTGTG
ACAGAAGCATTTGATTATCTGCACCGACTAGGCATCATCTACAGAGACCTGAAGCCAGAGAACTTAATTC
TGGATGCCGATGGCTACCTTAAGTTGGTTGACTTTGGATTCGCTAAGAAGATTGGCTCTGGACAGAAAAC
GTGGACATTCTGTGGGACTCCAGAGTATGTGGCCCCCGAGGTCATTCTTAACAAAGGACATGACTTCAGT
GTGGATTTCTGGTCCCTGGGGATTCTGGTCTATGAGCTCCTAACGGGCAACCCTCCCTTTTCTGGGATAG
ACCAAATGATGACCTACAATTTGATTCTCAAGGGAATCGAGAAAATGGATTTCCCCAGAAAGATAACAAG
GCGCCCTGAGGATTTGATCCGGAGGCTTTGCAGGCAAAACCCAACAGAAAGGCTGGGAAATCTGAAGAAC
GGGATCAACGACATTAAGAAACACAGGTGGTTAAATGGTTTTAATTGGGAAGGGCTGAAAGCACGGAGCC
TTCCGTCACCTTTACGGAGAGAGCTCAGTGGCCCCATAGATCACAGCTACTTTGACAAGTATCCTCCTGA
AAAGGGGGTGCCTCCGGATGAAATGTCAGGCTGGGATAAAGACTTCTGA

Translation (762 aa):
MGNGSVKPKHAKHPDGHSGNLSNEALRSKVLELERELRRKDAELQEREYHLKELREQLAKQTVAIAELTE
ELQSKCIQLNKLQDVIHVQGGSPLQASPDKVPLDVHRKTSGLVSLHSRRGAKAGVSAEPTTRTYDLNKPP
EFSFEKARVRKDSSEKKLITDALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYVIKQGEPGNHIFVLAE
GRLEVFQGEKLLSSIPMWTTFGELAILYNCTRTASVKAITNVKTWALDREVFQNIMRRTAQARDEEYRNF
LRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEEGSTFFILAKGKVKVTQSTEGHDQPQLIKTLQ
KGEYFGEKALISDDVRSANIIAEENDVACLVIDRETFNQTVGTFDELQKYLEGYVATLNRDDEKRHAKRS
MSSWKLSKALSLEMIQLKEKVARFSSTSPFQNLEIIATLGVGGFGRVELVKVKNENVAFAMKCIRKKHIV
DTKQQEHVYSEKRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRGSFDEPTSKFCVACV
TEAFDYLHRLGIIYRDLKPENLILDADGYLKLVDFGFAKKIGSGQKTWTFCGTPEYVAPEVILNKGHDFS
VDFWSLGILVYELLTGNPPFSGIDQMMTYNLILKGIEKMDFPRKITRRPEDLIRRLCRQNPTERLGNLKN
GINDIKKHRWLNGFNWEGLKARSLPSPLRRELSGPIDHSYFDKYPPEKGVPPDEMSGWDKDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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