NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45918.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45918.1 Public Homo sapiens 19 TEKTIP1 24 110 108 CCDS HistoryNCBI Gene:100128569Re-query CCDS DB by CCDS ID:45918.1Re-query CCDS DB by GeneID:100128569See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45918.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329493.6 ENSP00000327950.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329493.6Link to Ensembl Protein Viewer:ENSP00000327950.4Re-query CCDS DB by Nucleotide ID:ENST00000329493Re-query CCDS DB by Protein ID:ENSP00000327950
Original member Current member NCBI NM_001135580.2 NP_001129052.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135580.2Link to Protein Sequence:NP_001129052.1Re-query CCDS DB by Nucleotide ID:NM_001135580Re-query CCDS DB by Protein ID:NP_001129052Link to BLAST:NP_001129052.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129052.1 209 A6NCJ1 209 100% 0 0

Chromosomal Locations for CCDS 45918.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 3539178 3539260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3543235 3543473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3543555 3543680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3543829 3544010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (630 nt):
ATGCAAACCCTCAGGCAAGAGGCTGCACGGCCCTGTATCCCCTCGGGGACCCTCGAGGCCAGCTTCCCAG
CACCGCTGTACAGCGATGACTACCTGTCCCTGGAGGGTTCCCGCTGGCCACCAGCCATCAGGCAGGCCAC
ACGCTGGAAGTACACGCCCATGGGACGGGACGCAGCCGGCCAGCTGTGGTACACAGGCCTGACCAACTCG
GACGCCTGGGAAGCCTGGTACAACCTGCCACGGGCCCCGGCCAGCCCCTTCCGCGAGGCCTACAACCGCT
GGCACAGCTGCTACCAACACCGTGAGTGCAGCATGCCATCGGCCTACACCCAGCACCTGCGGGAGACCGC
CTGGCATGACCCCATCGTCCCTGCCCAGTACCAGGCCCCCAGCACCCGGTGGGGGAGCGCGCTGTGGAAA
GACAGGCCAATCCGGGGCAAGGAATACGTGCTCAACAGGAACCGGTACGGGGTGGAGCCACTGTGGAGGG
CATCAGACTACGTGCCCTCCCTGTCGGCACCCCAGCGCCCGCCCGGCACCACCCAGAACTACCGGGAGTG
GGTCCTGGAACCATACTGCCCCTCCACCTGCCAGCGGTCCCCGCCTTCCCTCACACCCACTCCCCGATAA

Translation (209 aa):
MQTLRQEAARPCIPSGTLEASFPAPLYSDDYLSLEGSRWPPAIRQATRWKYTPMGRDAAGQLWYTGLTNS
DAWEAWYNLPRAPASPFREAYNRWHSCYQHRECSMPSAYTQHLRETAWHDPIVPAQYQAPSTRWGSALWK
DRPIRGKEYVLNRNRYGVEPLWRASDYVPSLSAPQRPPGTTQNYREWVLEPYCPSTCQRSPPSLTPTPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH