NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, December 17, 2024, starting at 8:00 a.m. EST for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS74703.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74703.2 Public Homo sapiens 20 ZNF133 24 110 108 CCDS HistoryNCBI Gene:7692Re-query CCDS DB by CCDS ID:74703.2Re-query CCDS DB by GeneID:7692See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 74703.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535822.6 ENSP00000439427.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535822.6Link to Ensembl Protein Viewer:ENSP00000439427.3Re-query CCDS DB by Nucleotide ID:ENST00000535822Re-query CCDS DB by Protein ID:ENSP00000439427
Original member Current member EBI ENST00000630056.1 ENSP00000485741.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000630056.1Link to Ensembl Protein Viewer:ENSP00000485741.1Re-query CCDS DB by Nucleotide ID:ENST00000630056Re-query CCDS DB by Protein ID:ENSP00000485741
Original member Current member NCBI NM_001283005.3 NP_001269934.2 Accepted alive Link to Nucleotide Sequence:NM_001283005.3Link to Protein Sequence:NP_001269934.2Re-query CCDS DB by Nucleotide ID:NM_001283005Re-query CCDS DB by Protein ID:NP_001269934Link to BLAST:NP_001269934.2
Original member Current member NCBI NM_001283006.3 NP_001269935.2 Accepted alive Link to Nucleotide Sequence:NM_001283006.3Link to Protein Sequence:NP_001269935.2Re-query CCDS DB by Nucleotide ID:NM_001283006Re-query CCDS DB by Protein ID:NP_001269935Link to BLAST:NP_001269935.2
Original member Current member NCBI NM_001283007.3 NP_001269936.2 Accepted alive Link to Nucleotide Sequence:NM_001283007.3Link to Protein Sequence:NP_001269936.2Re-query CCDS DB by Nucleotide ID:NM_001283007Re-query CCDS DB by Protein ID:NP_001269936Link to BLAST:NP_001269936.2
Original member Current member NCBI NM_001283008.3 NP_001269937.2 Accepted alive Link to Nucleotide Sequence:NM_001283008.3Link to Protein Sequence:NP_001269937.2Re-query CCDS DB by Nucleotide ID:NM_001283008Re-query CCDS DB by Protein ID:NP_001269937Link to BLAST:NP_001269937.2
Original member Current member NCBI NM_001352453.2 NP_001339382.2 Accepted alive Link to Nucleotide Sequence:NM_001352453.2Link to Protein Sequence:NP_001339382.2Re-query CCDS DB by Nucleotide ID:NM_001352453Re-query CCDS DB by Protein ID:NP_001339382Link to BLAST:NP_001339382.2
Original member Current member NCBI NM_001387320.1 NP_001374249.1 Accepted alive Link to Nucleotide Sequence:NM_001387320.1Link to Protein Sequence:NP_001374249.1Re-query CCDS DB by Nucleotide ID:NM_001387320Re-query CCDS DB by Protein ID:NP_001374249Link to BLAST:NP_001374249.1
Original member Current member NCBI NM_001387321.1 NP_001374250.1 Accepted alive Link to Nucleotide Sequence:NM_001387321.1Link to Protein Sequence:NP_001374250.1Re-query CCDS DB by Nucleotide ID:NM_001387321Re-query CCDS DB by Protein ID:NP_001374250Link to BLAST:NP_001374250.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269934.2 559 P52736-3 559 100% 0 0
NP_001269935.2 559 P52736-3 559 100% 0 0
NP_001269936.2 559 P52736-3 559 100% 0 0
NP_001269937.2 559 P52736-3 559 100% 0 0
NP_001339382.2 559 P52736-3 559 100% 0 0
NP_001374249.1 559 P52736-3 559 100% 0 0
NP_001374250.1 559 P52736-3 559 100% 0 0

Chromosomal Locations for CCDS 74703.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 18315137 18316816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGCAGCATGTGCTGTGTAATCATCCCCCCTGGATCTTCACATGCTTGTGTGCAGAAGGTAACATCCAGC
CTGGGGATCCGGGCCCAGGGGACCAGGAGAAGCAGCAACAAGCCTCTGAGGGGAGACCCTGGAGTGATCA
AGCAGAAGGTCCTGAGGGAGAAGGTGCCATGCCTTTGTTTGGAAGAACCAAGAAAAGGACTCTGGGAGCG
TTCTCCAGGCCACCCCAGAGGCAGCCAGTCAGCTCTCGGAACGGCCTCAGAGGGGTGGAGTTAGAAGCCA
GCCCAGCTCAGTCAGGGAACCCTGAGGAAACAGACAAATTGTTGAAGAGGATAGAAGTCTTAGGATTTGG
AACAGTCAACTGTGGAGAGTGTGGACTGAGCTTCAGCAAGATGACAAACCTGCTCAGTCACCAGCGGATA
CACTCAGGGGAGAAGCCCTACGTGTGTGGGGTATGTGAGAAGGGCTTCAGCCTAAAGAAGAGCCTCGCCA
GACACCAGAAGGCACACTCGGGGGAGAAGCCAATTGTGTGCAGGGAGTGTGGACGAGGCTTTAACCGGAA
GTCAACGCTAATCATACACGAACGGACACACTCCGGTGAGAAACCTTACATGTGCAGTGAGTGTGGGCGA
GGCTTCAGCCAGAAGTCAAACCTCATCATACACCAGAGGACACACTCAGGGGAAAAGCCTTACGTGTGCC
GGGAATGTGGCAAAGGCTTCAGCCAGAAGTCAGCTGTCGTGAGACACCAGAGGACACACTTGGAGGAGAA
GACCATCGTGTGCAGTGACTGTGGCCTGGGCTTCAGCGACAGGTCAAACCTCATCTCCCACCAGAGGACG
CACTCTGGGGAGAAGCCCTACGCCTGCAAGGAGTGTGGGCGATGCTTCAGGCAGAGGACCACCCTTGTCA
ACCACCAGAGGACACACTCAAAGGAGAAGCCCTATGTGTGCGGGGTGTGTGGGCACAGCTTCAGCCAGAA
TTCAACCCTCATCTCTCACAGGCGGACACACACTGGGGAGAAGCCGTATGTTTGTGGGGTGTGTGGGCGA
GGCTTTAGTCTCAAGTCACACCTCAACAGACACCAGAACATACACTCAGGAGAGAAGCCCATTGTGTGCA
AGGACTGTGGCCGGGGCTTCAGCCAGCAATCCAACCTCATCAGACACCAGAGGACGCACTCAGGCGAGAA
GCCCATGGTGTGTGGGGAGTGCGGGCGAGGCTTCAGCCAGAAGTCAAACCTTGTTGCACACCAGAGGACG
CACTCAGGGGAGAGGCCGTATGTGTGCCGAGAGTGCGGGCGAGGCTTTAGCCACCAGGCCGGTCTCATCA
GGCACAAGCGGAAGCACTCGAGGGAGAAGCCCTACATGTGCAGGCAGTGTGGACTGGGCTTTGGCAATAA
GTCAGCTCTAATTACACACAAGCGGGCTCACTCGGAAGAGAAGCCTTGTGTGTGCAGAGAGTGTGGCCAA
GGCTTTCTCCAAAAGTCACACCTCACCTTACATCAAATGACACATACGGGGGAGAAGCCATATGTGTGCA
AGACGTGTGGGCGGGGCTTCAGCCTCAAGTCTCACCTCAGCAGACACAGGAAGACCACGTCTGTCCACCA
CAGACTGCCAGTGCAGCCCGACCCTGAGCCGTGTGCAGGGCAACCTTCGGATTCCTTATACTCTCTCTGA

Translation (559 aa):
MQHVLCNHPPWIFTCLCAEGNIQPGDPGPGDQEKQQQASEGRPWSDQAEGPEGEGAMPLFGRTKKRTLGA
FSRPPQRQPVSSRNGLRGVELEASPAQSGNPEETDKLLKRIEVLGFGTVNCGECGLSFSKMTNLLSHQRI
HSGEKPYVCGVCEKGFSLKKSLARHQKAHSGEKPIVCRECGRGFNRKSTLIIHERTHSGEKPYMCSECGR
GFSQKSNLIIHQRTHSGEKPYVCRECGKGFSQKSAVVRHQRTHLEEKTIVCSDCGLGFSDRSNLISHQRT
HSGEKPYACKECGRCFRQRTTLVNHQRTHSKEKPYVCGVCGHSFSQNSTLISHRRTHTGEKPYVCGVCGR
GFSLKSHLNRHQNIHSGEKPIVCKDCGRGFSQQSNLIRHQRTHSGEKPMVCGECGRGFSQKSNLVAHQRT
HSGERPYVCRECGRGFSHQAGLIRHKRKHSREKPYMCRQCGLGFGNKSALITHKRAHSEEKPCVCRECGQ
GFLQKSHLTLHQMTHTGEKPYVCKTCGRGFSLKSHLSRHRKTTSVHHRLPVQPDPEPCAGQPSDSLYSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH