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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS25048.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
25048.1 |
Public |
Mus musculus |
11 |
Prpf8 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 25048.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000018449.10 |
ENSMUSP00000018449.4 |
Accepted |
alive |
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EBI |
ENSMUST00000102510.7 |
ENSMUSP00000099568.1 |
Accepted |
alive |
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NCBI |
NM_138659.2 |
NP_619600.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_619600.2 |
2335 |
Q99PV0 |
2335 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 25048.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7008 nt): ATGGCCGGAGTGTTTCCTTACCGAGGGCCGGGTAACCCGGTGCCCGGCCCTCTAGCCCCGCTGCCGGATT ATATGTCAGAGGAGAAGCTGCAGGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGA GAAGCGGAAATTTGGGTTTGTGGATGCTCAGAAGGAAGACATGCCACCAGAACATGTCAGGAAGATCATT CGAGACCATGGAGACATGACCAACAGGAAGTTCCGTCATGACAAAAGGGTCTATTTGGGAGCTCTTAAGT ACATGCCTCATGCAGTCCTCAAGCTCCTTGAGAACATGCCCATGCCTTGGGAGCAGATCCGGGACGTGCC TGTGCTGTACCACATCACTGGAGCCATCTCCTTTGTTAACGAGATTCCCTGGGTTATCGAGCCGGTTTAC ATCTCCCAGTGGGGGTCAATGTGGATCATGATGCGTAGAGAAAAAAGAGACAGGAGGCATTTCAAGAGGA TGCGTTTCCCCCCTTTCGATGACGAGGAACCGCCCCTGGATTATGCCGACAACATCTTAGATGTTGAGCC ACTGGAAGCCATTCAGCTAGAGCTGGACCCAGAGGAGGATGCCCCTGTGTTGGACTGGTTCTATGACCAC CAGCCTTTGAGAGACAGTAGGAAGTACGTTAATGGTTCCACCTACCAACGCTGGCAGTTCACATTGCCTA TGATGTCCACACTCTACCGACTGGCCAATCAGCTTCTGACTGACCTTGTAGATGACAACTACTTCTATCT CTTTGATCTGAAGGCCTTTTTTACCTCTAAGGCACTCAACATGGCCATTCCTGGGGGACCCAAATTTGAG CCTCTTGTTCGAGACATCAACTTACAGGATGAAGACTGGAATGAATTTAACGATATTAATAAGATCATCA TCCGTCAGCCTATTCGTACTGAGTACAAGATTGCTTTTCCTTACCTGTATAACAACCTTCCACACCACGT CCACCTGACCTGGTACCACACTCCCAACGTTGTGTTCATCAAGACTGAGGATCCTGATCTGCCAGCTTTC TACTTTGATCCTTTGATCAACCCAATCTCCCATAGACACTCAGTCAAGAGCCAAGAACCACTGCCTGATG ATGATGAAGAGTTTGAACTCCCAGAGTTTGTCGAGCCCTTCCTGAAGGATACACCTCTCTATACAGACAA CACAGCCAATGGCATTGCCCTGCTCTGGGCACCACGGCCCTTCAACCTACGCTCTGGTCGTACCCGCCGG GCCTTGGACATACCCCTTGTCAAGAACTGGTATCGGGAGCACTGTCCTGCTGGGCAGCCTGTGAAGGTTC GAGTCTCTTATCAGAAGCTGCTTAAGTACTATGTGCTGAATGCCCTCAAGCACCGGCCTCCCAAAGCCCA GAAGAAGAGGTATCTGTTCCGTTCTTTCAAAGCTACCAAATTCTTTCAGTCCACCAAGCTGGACTGGGTG GAGGTAGGGCTGCAGGTTTGCCGCCAGGGCTACAACATGCTCAACCTTCTCATTCACCGGAAGAACCTCA ACTATCTGCACTTGGACTACAACTTCAACCTGAAGCCTGTCAAGACGCTCACCACCAAGGAAAGAAAGAA ATCCCGTTTTGGGAATGCTTTCCATCTATGTCGGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACAGC CATGTGCAGTATCGCTTGGGCAATGTAGATGCCTTCCAGCTGGCAGATGGTTTGCAGTATATATTTGCCC ACGTGGGACAGTTGACAGGCATGTATCGATACAAATATAAGCTGATGCGGCAGATCCGCATGTGCAAGGA CTTGAAACATCTCATCTATTACCGCTTCAACACGGGTCCTGTAGGGAAAGGCCCTGGCTGTGGTTTCTGG GCTGCTGGCTGGCGGGTCTGGCTGTTCTTTATGCGTGGAATTACCCCTCTGCTAGAGCGATGGCTGGGCA ACCTTCTGGCCCGACAGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAGACAGTAACGAAGCAGCGGGT GGAGTCGCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGCACGACATTCTGGACATGATGCCTGAAGGC ATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAACA TCCCTTGGAAGGTCCCAGGACTGCCAACACCTATAGAGAATATGATTCTTCGGTACGTTAAGGCCAAGGC TGATTGGTGGACCAATACTGCCCACTACAACCGGGAACGGATCCGTCGCGGGGCTACTGTAGACAAGACT GTTTGCAAAAAGAACCTGGGCCGCCTCACTCGCCTGTATCTGAAGGCAGAGCAGGAGCGGCAGCACAATT ACCTGAAGGATGGGCCTTACATCACAGCCGAGGAGGCAGTGGCCGTGTATACCACCACTGTGCACTGGCT GGAGAGCCGGAGATTCTCGCCCATCCCCTTCCCTCCACTCTCCTACAAGCATGATACCAAGCTGCTCATC TTGGCTCTGGAGCGTCTCAAGGAAGCTTATAGTGTGAAGTCTAGGTTAAACCAGTCTCAGAGGGAGGAGC TGGGTCTGATTGAACAAGCCTATGACAACCCCCATGAGGCTTTGTCCCGCATCAAGCGTCACCTCCTCAC ACAGAGAGCCTTTAAGGAAGTGGGCATTGAGTTTATGGATCTCTATAGCCACCTTGTACCAGTGTATGAT GTGGAACCACTGGAGAAAATAACTGATGCTTACCTGGACCAGTACCTGTGGTATGAAGCAGATAAACGCC GTCTTTTCCCACCCTGGATCAAGCCTGCTGACACAGAGCCACCTCCACTGCTTGTTTACAAGTGGTGTCA AGGCATTAATAACCTGCAGGATGTGTGGGAGACGAGTGAGGGCGAGTGCAACGTCATGCTGGAGTCTCGG TTTGAGAAGATGTATGAGAAGATTGACCTGACCCTGCTTAACAGGCTGCTGCGACTCATTGTGGACCACA ACATAGCTGACTACATGACGGCCAAGAACAACGTAGTCATCAACTATAAGGACATGAACCATACAAACTC ATATGGAATCATCAGAGGCCTGCAGTTTGCCTCATTCATTGTACAGTACTATGGCTTGGTGATGGATTTG CTTGTACTGGGATTGCACCGGGCCAGTGAGATGGCTGGGCCTCCTCAGATGCCAAATGACTTTCTCAGTT TCCAGGACATAGCCACTGAGGCTGCACACCCAATCCGACTCTTCTGTAGATACATTGATCGCATCCATAT TTTCTTCAGGTTCACAGCAGATGAGGCTCGGGATCTGATCCAGCGTTACCTGACAGAACACCCAGACCCC AACAATGAAAACATTGTTGGCTACAATAACAAGAAATGCTGGCCCCGAGATGCCCGAATGCGGCTCATGA AGCATGATGTCAACTTGGGTCGGGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACGATCGGTGACTAC AGTACAGTGGGAGAATAGCTTTGTGTCTGTGTACAGTAAAGACAACCCCAACCTGCTATTCAACATGTGT GGCTTTGAGTGCCGCATCCTGCCTAAGTGCCGTACCAGCTATGAAGAGTTCACCCACAAGGACGGGGTCT GGAACCTACAGAATGAGGTTACCAAGGAGCGGACAGCTCAGTGCTTCCTGCGTGTGGATGATGAGTCAAT GCAACGCTTCCATAACCGTGTGCGGCAGATTCTGATGGCCTCTGGCTCCACCACGTTCACCAAGATTGTG AATAAGTGGAACACAGCTCTCATCGGCCTTATGACATATTTTCGAGAGGCTGTGGTGAATACACAGGAAC TCCTGGACTTATTGGTGAAGTGTGAAAACAAGATCCAGACACGTATCAAGATTGGATTGAACTCCAAGAT GCCTAGCCGGTTCCCGCCTGTTGTATTCTACACCCCTAAGGAGCTGGGTGGGCTTGGCATGCTCTCGATG GGCCATGTGCTTATCCCCCAGTCTGACCTCAGGTGGTCCAAGCAGACAGATGTGGGCATCACACACTTCC GTTCAGGAATGAGTCATGAAGAAGACCAACTGATTCCCAACTTGTACCGCTACATACAGCCATGGGAGAG CGAGTTCATTGACTCCCAGCGGGTCTGGGCTGAGTATGCACTCAAGAGACAAGAGGCTATTGCTCAGAAC AGACGCTTGACTTTAGAAGATTTAGAAGATTCATGGGATCGAGGCATTCCCCGGATCAATACCCTCTTCC AGAAAGACCGGCACACATTGGCTTATGATAAAGGCTGGCGTGTCCGAACTGACTTTAAGCAGTACCAGGT TTTGAAGCAGAACCCCTTTTGGTGGACACATCAGCGGCATGATGGCAAGCTTTGGAACCTCAATAACTAC CGCACAGACATGATTCAGGCGCTGGGTGGTGTGGAGGGCATTCTGGAGCACACTCTCTTCAAGGGCACTT ACTTCCCCACCTGGGAGGGTCTGTTCTGGGAGAAAGCCAGTGGCTTTGAGGAGTCCATGAAGTGGAAGAA GCTGACCAATGCTCAGCGATCAGGATTAAACCAGATTCCTAATCGTAGATTTACCCTCTGGTGGTCCCCA ACCATCAATCGAGCCAATGTCTATGTGGGCTTCCAGGTGCAGCTGGACCTGACAGGAATCTTCATGCACG GCAAGATCCCCACACTGAAGATCTCTCTCATCCAGATATTCCGAGCTCACTTGTGGCAGAAGATCCATGA GAGCATCGTGATGGACTTGTGTCAGGTCTTTGACCAGGAACTGGATGCACTGGAAATTGAGACAGTGCAA AAGGAGACAATCCATCCCCGAAAGTCCTATAAGATGAACTCTTCCTGTGCGGATATACTACTCTTTGCCT CCTATAAGTGGAATGTCTCCCGGCCCTCGCTGCTGGCAGACTCCAAGGATGTGATGGACAGCACCACCAC ACAGAAGTATTGGATTGACATCCAATTACGCTGGGGAGACTATGATTCCCATGATATTGAGCGCTATGCC CGGGCCAAGTTCCTGGATTACACCACAGACAACATGAGTATCTACCCTTCGCCCACAGGCGTGCTCATTG CCATTGATCTGGCCTATAATCTACACAGTGCCTATGGAAACTGGTTCCCGGGCAGCAAGCCTCTCATACA GCAGGCCATGGCCAAGATCATGAAGGCAAACCCTGCGTTGTATGTGTTACGTGAACGGATACGCAAAGGA TTACAGCTGTATTCATCTGAGCCCACTGAGCCTTACCTGTCCTCTCAGAACTATGGTGAACTCTTCTCTA ACCAGATTATCTGGTTTGTGGATGACACCAATGTCTATAGAGTAACTATCCACAAGACCTTTGAGGGGAA CTTGACAACTAAACCCATCAATGGGGCCATCTTCATCTTCAATCCACGAACGGGACAGCTGTTCCTCAAG ATAATCCACACATCTGTATGGGCTGGACAGAAGCGTTTGGGTCAGTTGGCCAAGTGGAAGACTGCTGAGG AAGTGGCTGCCCTGATCCGATCTCTGCCTGTGGAGGAACAGCCTAAACAGATCATTGTCACTCGGAAGGG CATGCTGGATCCTCTGGAGGTCCACTTACTGGATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCAG CTGCCCTTCCAGGCTTGTCTCAAGGTGGAGAAGTTTGGGGATCTCATCCTTAAAGCCACCGAGCCCCAGA TGGTCCTTTTCAACCTCTATGATGACTGGCTCAAGACTATCTCCTCCTACACGGCTTTCTCCCGTCTCAT TCTGATTCTGCGGGCTTTGCATGTGAACAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGACTACT GTTACGGAACCCCACCACATCTGGCCCACGCTGACTGACGAGGAATGGATCAAGGTGGAGGTACAGCTCA AGGATCTGATCTTGGCTGACTACGGCAAGAAAAACAACGTGAATGTGGCGTCACTGACACAGTCAGAAAT TCGAGACATCATCCTGGGAATGGAGATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAA AAGCAGACCAAGGAACAGTCCCAGCTCACTGCTACACAGACTCGAACTGTCAACAAGCACGGTGACGAGA TTATCACTTCAACCACTAGCAACTATGAGACCCAGACCTTCTCATCAAAGACTGAATGGAGAGTCAGGGC CATCTCTGCTGCCAACCTGCATCTGCGGACCAATCATATTTATGTTTCATCTGATGACATTAAGGAGACT GGTTATACGTACATTCTTCCGAAAAACGTGCTTAAGAAGTTCATCTGCATATCTGATCTTCGTGCCCAAA TTGCAGGATACCTGTATGGGGTGAGCCCTCCAGATAACCCTCAGGTGAAGGAGATCCGTTGTATTGTGAT GGTGCCGCAGTGGGGCACGCACCAGACTGTGCACCTGCCCAGCCAGCTGCCCCAGCATGAGTACCTCAAG GAGATGGAACCCTTAGGTTGGATCCACACTCAGCCCAATGAATCCCCCCAGCTATCACCCCAAGATGTCA CCACTCATGCCAAAATCATGGCTGACAACCCATCTTGGGATGGGGAGAAGACTATTATCATCACGTGCAG CTTCACACCAGGCTCCTGCACACTGACAGCCTACAAGCTGACACCCAGTGGGTATGAGTGGGGCCGGCAG AACACAGACAAAGGCAACAACCCCAAAGGCTACCTACCCTCGCACTACGAGAGGGTTCAGATGCTCCTGT CTGACCGATTCCTCGGCTTCTTCATGGTCCCCGCCCAGTCCTCCTGGAACTACAACTTTATGGGTGTTCG ACATGATCCCAACATGAAATACGAGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATGAGGTCCACAGG CCCTCCCACTTCCTCAACTTCGCCCTTCTGCAGGAGGGTGAGGTCTACTCTGCAGACAGAGAGGACCTCT ATGCCTAG
Translation (2335 aa): MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKII RDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVY ISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDH QPLRDSRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFE PLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAF YFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWV EVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDS HVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFW AAGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEG IKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKT VCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYD VEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESR FEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDL LVLGLHRASEMAGPPQMPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDP NNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMC GFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSM GHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQN RRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNY RTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSP TINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQ KETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKG LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQ LPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTT VTEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIE KQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPSQLPQHEYLK EMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQ NTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHR PSHFLNFALLQEGEVYSADREDLYA
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