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Report for CCDS92260.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92260.1 Public Homo sapiens 17 TBC1D26 24 110 108 CCDS HistoryNCBI Gene:353149Re-query CCDS DB by CCDS ID:92260.1Re-query CCDS DB by GeneID:353149See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92260.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437605.4 ENSP00000410111.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000437605.4Link to Ensembl Protein Viewer:ENSP00000410111.3Re-query CCDS DB by Nucleotide ID:ENST00000437605Re-query CCDS DB by Protein ID:ENSP00000410111
Original member Current member NCBI NM_001388465.1 NP_001375394.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001388465.1Link to Protein Sequence:NP_001375394.1Re-query CCDS DB by Nucleotide ID:NM_001388465Re-query CCDS DB by Protein ID:NP_001375394Link to BLAST:NP_001375394.1

Chromosomal Locations for CCDS 92260.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 15735349 15735423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15735597 15735679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15737484 15737523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15737997 15738077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15738280 15738387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15738721 15738830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15740100 15740148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15741122 15741221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15741942 15742036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15742414 15742479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15742909 15743008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15743367 15743516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 15744243 15744592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGAGATGGATGGGGACCCGTATAACCTGCCTGCCCAGGGGCAAGGCAATATCATCATTACTAAGTATG
AGCAGGGACACCGAGCTGGGGCAGCAGTGGACTTGGGGCATGAGCAGGTTGATGTCAGAAAATACACCAA
TAACCTCGGGATTGTGCATGAGATGGAGCTGCCCCACGTCAGTGCCCTGGAGGTGAAGCAAAGACGCAAG
GAAAGTAAACGTACCAACAAGTGGCAAAAGATGCTTGCAGACTGGACAAAATATAGGAGCACCAAGAAGC
TGTCTCAAAGAGTATACAAAGTCATTCCCCTGGCGGTACGGGGCCGGGCGTGGTCACTTTTGCTAGATAT
TGACAGAATCAAGTCCCAGAACCCAGGCAAATATAAGGTCATGAAGGAGAAGGGCAAGAGGTCCTCCAGA
ATCATCCACTGCATCCAGCTAGATGTCAGCCACACCCTGCAGAAACACATGATGTTCATACAAAGATTCG
GAGTCAAGCAGCAGGAATTATGTGACATCCTCGTGGCCTATTCTGCATATAACCCTGAGGTGGGCTACCA
CAGGGACCTGAGCCGCATCACTGCCATCCTCCTCCTGTGTCTGCCAGAGGAAGATGCTTTCTGGGCGCTT
ACCCAGTTGCTCGCTGTATTCTACAGCCCAAATACTGCCTGGCTCGAGAGGCTCCTATCGCACCAGGAGC
AGGTGCTGCACAAGTCCTTCCCAAAGATCATGAGACACCTGGGCAAGGAAGGGCTGTGCATTGAGGGTTC
CATGCTGACGAGGCTCCTCCGGTGTTTCCTTGATGGGAAATCCTTCGGGCTCACCCTGAGACTGTGGGAT
GTGTTCATCTTGGAGGGCGCGCGGGTACTGACAGCCATGGTGCATGCATCATTCAAAATACACAGGAAGC
ACCTCATGAAGCTTTCCTGGAGCACTGTCTGGGAGTTTCAGGAGCGACTCTCTCAGAGCTGGGCCCTGGA
GGACAACGCGGTCCTCAGGAACCTTCAAACCTCTATGAAGGAACTCACAAAAAAACACTGGGACCTGCCA
CCCCCAGGGAGCTTGCTACAAAATGCACATTGCTATACCATAGCCTGGGGCTTGCAATCCAAGGCTGGCA
AGGATTCCTGCACGTCAAGGGCCTCAGGTGACTTTCATGCACACCCAAGTCAGAAGGCTCTCCTGAATCC
TGGATGTCACCTTCCTGCCCAAAAAAGGAGGAACGAGGGTCAACCAGCAGCAGACCAGTCACAAAAAGAG
ATGAAATGTGAGTGCATGGCCTTCCTGACACCCAGACAAAACTTTGGGCACAAAGCCAGGCTGCAGCTCT
GGCCACTGACTTGGACCAGGGATGCCCCCATGCAGGCCGGTGTGCCCTGGCTGCTCTTGACACCCTCTGG
CTCCTGA

Translation (468 aa):
MEMDGDPYNLPAQGQGNIIITKYEQGHRAGAAVDLGHEQVDVRKYTNNLGIVHEMELPHVSALEVKQRRK
ESKRTNKWQKMLADWTKYRSTKKLSQRVYKVIPLAVRGRAWSLLLDIDRIKSQNPGKYKVMKEKGKRSSR
IIHCIQLDVSHTLQKHMMFIQRFGVKQQELCDILVAYSAYNPEVGYHRDLSRITAILLLCLPEEDAFWAL
TQLLAVFYSPNTAWLERLLSHQEQVLHKSFPKIMRHLGKEGLCIEGSMLTRLLRCFLDGKSFGLTLRLWD
VFILEGARVLTAMVHASFKIHRKHLMKLSWSTVWEFQERLSQSWALEDNAVLRNLQTSMKELTKKHWDLP
PPGSLLQNAHCYTIAWGLQSKAGKDSCTSRASGDFHAHPSQKALLNPGCHLPAQKRRNEGQPAADQSQKE
MKCECMAFLTPRQNFGHKARLQLWPLTWTRDAPMQAGVPWLLLTPSGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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