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Report for CCDS1637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1637.1 Public Homo sapiens 1 OR2L13 24 110 108 CCDS HistoryNCBI Gene:284521Re-query CCDS DB by CCDS ID:1637.1Re-query CCDS DB by GeneID:284521See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1637.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358120.4 ENSP00000350836.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358120.4Link to Ensembl Protein Viewer:ENSP00000350836.2Re-query CCDS DB by Nucleotide ID:ENST00000358120Re-query CCDS DB by Protein ID:ENSP00000350836
Original member Current member EBI ENST00000641893.1 ENSP00000492949.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641893.1Link to Ensembl Protein Viewer:ENSP00000492949.1Re-query CCDS DB by Nucleotide ID:ENST00000641893Re-query CCDS DB by Protein ID:ENSP00000492949
Original member Current member EBI ENST00000641714.1 ENSP00000493075.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641714.1Link to Ensembl Protein Viewer:ENSP00000493075.1Re-query CCDS DB by Nucleotide ID:ENST00000641714Re-query CCDS DB by Protein ID:ENSP00000493075
Original member Current member NCBI NM_001304535.3 NP_001291464.1 Accepted alive Link to Nucleotide Sequence:NM_001304535.3Link to Protein Sequence:NP_001291464.1Re-query CCDS DB by Nucleotide ID:NM_001304535Re-query CCDS DB by Protein ID:NP_001291464Link to BLAST:NP_001291464.1
Original member Current member NCBI NM_001395936.1 NP_001382865.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395936.1Link to Protein Sequence:NP_001382865.1Re-query CCDS DB by Nucleotide ID:NM_001395936Re-query CCDS DB by Protein ID:NP_001382865Link to BLAST:NP_001382865.1
Original member Current member NCBI NM_175911.5 NP_787107.1 Accepted alive Link to Nucleotide Sequence:NM_175911.5Link to Protein Sequence:NP_787107.1Re-query CCDS DB by Nucleotide ID:NM_175911Re-query CCDS DB by Protein ID:NP_787107Link to BLAST:NP_787107.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291464.1 312 Q8N349 312 100% 0 0
NP_001382865.1 312 Q8N349 312 100% 0 0
NP_787107.1 312 Q8N349 312 100% 0 0

Chromosomal Locations for CCDS 1637.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248099376 248100314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAGAAATGGAATCACACTTCAAATGATTTCATTTTGTTGGGTCTGCTTCCCCCAAATCAAACTGGAA
TATTTCTCTTGTGCCTTATCATCCTCATATTCTTTCTGGCCTCGGTGGGTAACTCGGCCATGATTCACCT
CATCCACGTGGATCCTCGTCTCCACACACCGATGTACTTTCTTCTCAGCCAGCTCTCCCTTATGGACCTG
ATGTACATCTCCACCACCGTCCCCAAGATGGCGTACAACTTCCTGTCCGGCCAGAAAGGCATCTCCTTCC
TGGGATGTGGTGTGCAAAGCTTCTTCTTCCTGACCATGGCGTGTTCTGAAGGCTTACTCCTGACCTCCAT
GGCCTACGACCGTTATTTGGCCATCTGCCACTCTCTCTATTATCCTATCCGCATGAGTAAAATGATGTGT
GTGAAGATGATTGGAGGCTCTTGGACACTGGGGTCCATCAACTCCTTGGCACACACAGTCTTTGCCCTTC
ATATTCCCTACTGCAGGTCTAGGGCTATTGACCATTTCTTCTGCGATGTCCCAGCCATGTTGCTTCTTGC
CTGTACAGATACTTGGGTCTATGAATATATGGTTTTTGTAAGTACAAGCCTCTTTCTCCTTTTCCCTTTC
ATTGGCATCACTTCTTCCTGTGGCCGAGTCCTATTTGCTGTCTATCATATGCACTCAAAGGAGGGGAGAA
AAAAGGCCTTCACCACCATTTCAACACATTTAACTGTAGTGATCTTTTACTATGCACCTTTTGTCTACAC
CTATCTTCGGCCCAGGAATCTCCGCTCACCAGCTGAAGACAAGATCCTGGCAGTCTTCTACACCATCCTT
ACCCCCATGCTCAATCCCATTATCTACAGCCTGAGGAATAAGGAAGTCCTGGGGGCTATGAGGAGAGTGT
TTGGGATATTCTCTTTCCTGAAAGAATAA

Translation (312 aa):
MEKWNHTSNDFILLGLLPPNQTGIFLLCLIILIFFLASVGNSAMIHLIHVDPRLHTPMYFLLSQLSLMDL
MYISTTVPKMAYNFLSGQKGISFLGCGVQSFFFLTMACSEGLLLTSMAYDRYLAICHSLYYPIRMSKMMC
VKMIGGSWTLGSINSLAHTVFALHIPYCRSRAIDHFFCDVPAMLLLACTDTWVYEYMVFVSTSLFLLFPF
IGITSSCGRVLFAVYHMHSKEGRKKAFTTISTHLTVVIFYYAPFVYTYLRPRNLRSPAEDKILAVFYTIL
TPMLNPIIYSLRNKEVLGAMRRVFGIFSFLKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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