CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS93385.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
93385.1 |
Public |
Homo sapiens |
3 |
COL6A5 |
24 |
110 |
108 |
|
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 93385.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000512836.6 |
ENSP00000422898.2 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_153264.7 |
NP_694996.5 |
|
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_694996.5 |
2526 |
A8TX70-2 |
2526 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 93385.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7581 nt): ATGAAGATCTTGCTAATTATATTTGTCCTAATCATTTGGACTGAAACATTGGCAGACCAGAGCCCAGGGC CAGGCCCTGTGTATGCAGATGTCGTGTTTCTGGTGGACAGCTCCGATCACCTGGGACCTAAGTCATTCCC ATTCGTGAAAACGTTCATCAACAAAATGATCAACAGTCTCCCCATAGAGGCCAACAAATACCGTGTAGCC CTGGCCCAGTACAGCGACGAGTTTCACAGTGAATTCCATCTGAGCACCTTCAAAGGCAGAAGCCCCATGC TGAACCACCTCAAGAAGAACTTTCAGTTCATTGGCGGGTCCCTGCAGATAGGAAAGGCTCTTCAGGAGGC TCATAGGACCTACTTCTCTGCACCCATAAATGGGAGAGACAGGAAACAGTTTCCCCCAATTTTGGTGGTC CTGGCTTCGGCTGAGTCTGAGGATGAAGTGGAAGAGGCTTCGAAAGCCCTGCAGAAAGACGGGGTGAAAA TTATCTCCGTGGGGGTGCAGAAAGCTTCTGAGGAAAATCTGAAGGCCATGGCCACATCCCATTTCCATTT CAACCTTCGGACAATCAGAGACCTCAGCACATTTTCCCAAAACATGACACAGATCATCAAGGATGTAACC AAGTATAAGGAGGGAGCCGTCGATGCTGATATGCAAGTTCACTTCCCCATATCCTGTCAGAAAGATTCAC TCGCTGACCTCGTGTTCCTGGTGGATGAGTCACTTGGGACCGGAGGAAATTTAAGGCATCTTCAGACCTT CCTTGAGAACATTACCAGCTCCATGGATGTGAAGGAAAATTGCATGCGACTTGGACTGATGAGTTACAGC AATAGTGCCAAGACTATTTCTTTTCTTAAATCAAGCACAACCCAATCTGAATTTCAGCAGCAAATCAAGA ATCTTTCTATCCAAGTTGGGAAATCCAATACAGGGGCTGCCATTGATCAGATGAGAAGAGACGGCTTCTC AGAGTCATATGGCAGCAGAAGAGCACAAGGAGTGCCTCAGATTGCAGTTCTGGTCACCCACAGACCATCA GATGATGAGGTGCATGATGCTGCGCTGAACCTTCGACTGGAGGATGTAAACGTGTTTGCCTTGAGCATCC AAGGGGCTAACAATACCCAGTTAGAAGAAATAGTGTCTTATCCTCCAGAACAGACAATTTCCACGCTGAA GTCCTATGCAGACTTAGAAACTTACAGTACAAAGTTCCTGAAAAAGCTCCAGAATGAAATATGGTCCCAA ATTTCTACTTATGCTGAACAAAGGAATCTTGATAAAACTGGCTGTGTGGATACAAAAGAGGCTGATATCC ACTTCCTCATTGATGGCTCAAGCAGCATCCAGGAGAAACAGTTTGAGCAAATCAAGAGATTTATGTTGGA AGTGACAGAAATGTTTAGCATTGGCCCAGACAAAGTCCGAGTTGGAGTTGTGCAGTATTCAGATGACACA GAAGTGGAATTTTATATCACTGACTATTCTAATGATATTGACTTAAGAAAGGCTATTTTTAACATTAAGC AACTAACTGGTGGAACTTATACTGGGAAAGCTCTGGATTACATACTGCAAATAATAAAAAATGGAATGAA GGATAGAATGAGCAAGGTTCCCTGTTACCTCATTGTGTTGACTGATGGGATGTCCACAGACAGAGTCGTG GAACCTGCTAAGAGACTAAGGGCTGAGCAAATCACTGTTCATGCAGTTGGCATTGGGGCAGCTAATAAAA TAGAACTGCAAGAAATTGCTGGGAAAGAAGAAAGGGTTAGCTTTGGGCAGAACTTTGATGCTTTGAAAAG CATAAAAAATGAAGTCGTTCGTGAAATCTGCGCTGAAAAAGGATGTGAAGACATGAAGGCCGACATCATG TTTCTGGTGGACAGTTCTTGGAGTATAGGAAATGAAAATTTTAGGAAAATGAAAATCTTCATGAAAAACC TGTTAACTAAAATTCAAATTGGTGCAGACAAAACCCAGATTGGTGTTGTTCAGTTCAGTGATAAAACTAA GGAAGAGTTCCAGCTTAATAGATATTTTACACAGCAAGAAATTTCTGATGCAATAGATAGAATGTCTCTC ATCAATGAAGGCACTTTAACTGGAAAGGCACTAAATTTTGTAGGTCAATACTTCACCCACTCCAAGGGGG CCCGTTTGGGGGCCAAAAAATTTCTCATCCTCATCACAGATGGAGTAGCGCAGGATGATGTGAGAGATCC TGCTAGAATTCTTCGGGGCAAAGATGTGACCATCTTCTCTGTAGGAGTATACAATGCCAATAGATCTCAG CTAGAAGAGATCAGTGGGGATAGCAGCCTAGTTTTTCATGTTGAGAACTTCGATCATCTAAAGGCACTAG AAAGGAAACTTATCTTTCGTGTGTGTGCTCTCCATGATTGTAAAAGGATTACACTACTAGACGTTGTGTT TGTGCTGGATCATTCAGGTAGCATAAAAAAACAATATCAAGATCACATGATTAACCTAACTATCCATTTG GTGAAGAAAGCAGATGTTGGCAGGGACCGAGTTCAGTTTGGAGCCCTCAAATACTCTGACCAACCTAACA TCCTTTTCTACCTTAATACATACTCGAACAGATCAGCAATAATTGAGAATCTGCGGAAGCGCAGGGACAC TGGAGGGAACACCTACACTGCCAAGGCTCTCAAGCACGCAAATGCCCTGTTTACAGAGGAACATGGCAGC CGCATCAAGCAAAATGTGAAGCAGATGCTGATTGTCATCACCGATGGGGAATCCCATGACCATGATCAGC TCAATGACACAGCATTGGAACTGAGAAACAAAGGCATCACCATCTTTGCAGTGGGTGTAGGAAAGGCCAA CCAAAAGGAACTTGAGGGTATGGCAGGGAATAAAAACAATACTATCTATGTAGATAATTTTGACAAACTG AAAGATGTTTTCACACTTGTTCAAGAACGTATGTGTACTGAAGCACCAGAGGTCTGTCATCTTCAGGAAG CTGACGTGATTTTCCTTTGCGATGGCTCTGACAGGGTATCTAATTCAGATTTTGTAACCATGACAACTTT CTTGTCAGACTTAATCGATAATTTTGACATTCAGTCTCAAAGAATGAAAATTGGTATGGCTCAATTTGGA AGCAACTACCAGAGTATTATTGAGTTGAAAAACTCTCTGACTAAAACCCAGTGGAAGACTCAAATTCAGA ATGTCTCCAAGAGCGGTGGATTTCCAAGAATTGACTTTGCCCTTAAAAAAGTGAGCAATATGTTTAATCT ACATGCTGGTGGGAGAAGAAATGCTGGTGTCCCCCAAACTTTGGTTGTTATCACATCTGGAGATCCTCGC TATGATGTGGCAGATGCAGTAAAAACCCTGAAGGACCTTGGAATTTGTGTCCTGGTTTTGGGCATAGGAG ATGTTTATAAGGAACATCTCCTGCCAATAACAGGCAATTCTGAAAAAATAATCACTTTTCAAGACTTTGA TAAATTAAAGAATGTGGATGTGAAAAAAAGAATCATCCGTGAAATCTGCCAGAGCTGTGGGAAAACCAAT TGCTTTATGGACATAGTGGTTGGGTTTGACATCTCCACTCATGTGCAGGGGCAGCCTTTGTTCCAGGGCC ACCCCCAGCTGGAATCCTACCTCCCAGGCATCTTAGAAGACATCAGCTCTATCAAGGGGGTGAGCTGTGG GGCTGGCACAGAGGCACAGGTGAGCTTGGCGTTTAAGGTGAACAGTGACCAAGGATTCCCTGCCAAGTTC CAAATCTATCAGAAAGCAGTGTTTGACAGCTTGCTGCAAGTCAACGTCAGTGGGCCAACTCATCTGAACG CACAGTTCTTGCGGTCTCTTTGGGACACATTTAAGGATAAATCTGCATCCCGGGGCCAGGTGCTGCTTAT TTTTTCAGACGGTCTCCAGAGTGAAAGCAACATAATGCTTGAAAATCAATCAGACAGGCTCAGAGAAGCA GGACTTGATGCTCTGCTGGTAGTGTCCCTTAACACAACTGCTCATCATGAGTTTTCTAGCTTTGAATTTG GAAAAAGATTCGATTACAGGACTCATCTGACTATTGGAATGAGAGAACTGGGCAAAAAACTATCACAGTA CCTGGGAAATATTGCAGAGAGGACTTGCTGCTGTACATTCTGCAAATGTCCAGGAATTCCAGGACCTCAT GGGACCCGAGGACTACAAGCCATGAAGGGTTCTCAAGGTCTGAAAGGCAGCAGAGGACACAGGGGAGAGG ATGGAAACCCTGGAGTACGAGGAGACACAGGACCCCAAGGAGACAAAGGGATTGCAGGATGTCCAGGGGC GTGGGGTCAGAAGGGACTCAAAGGATTTTCTGGACCTAAGGGAGGTCATGGAGACGATGGGATTGATGGA CTTGATGGGGAAGAGGGCTGTCATGGATTTCCTGGAATAAAAGGAGAAAAAGGTGATCCAGGATCTCAGG GCAGCCCAGGTTCCAGAGGTGCCCCTGGGCAGTATGGAGAGAAGGGCTTCCCAGGGGATCCGGGTAATCC AGGACAAAACAATAACATCAAAGGACAAAAGGGCTCCAAAGGAGAACAAGGAAGACAAGGTAGAAGTGGA CAGAAAGGGGTGCAAGGCAGTCCTAGTTCCAGAGGCAGCAGGGGAAGAGAAGGTCAAAGGGGACTCCGAG GTGTCTCAGGAGAACCAGGAAATCCTGGACCTACAGGCACATTGGGAGCTGAAGGATTACAAGGCCCACA GGGGTCACAGGGAAATCCTGGCAGAAAAGGAGAAAAAGGAAGCCAGGGGCAGAAAGGACCTCAGGGTTCT CCTGGGCTAATGGGAGCTAAAGGGAGCACTGGAAGACCTGGACTTTTGGGGAAAAAAGGAGAGCCTGGAC TTCCTGGAGATCTAGGGCCAGTGGGGCAAACTGGGCAGCGAGGAAGACAGGGAGATTCTGGCATCCCAGG CTACGGTCAGATGGGACGAAAAGGAGTAAAGGGCCCAAGAGGATTCCCTGGAGATGCGGGGCAGAAGGGT GATATTGGTAATCCTGGAATTCCTGGGGGACCTGGACCCAAAGGATTTAGGGGACTAGCACTCACTGTAG GCTTGAAAGGTGAAGAGGGATCTCGAGGACTCCCAGGCCCTCCTGGACAGAGAGGCATTAAAGGCATGGC AGGGCAGCCTGTATATTCTCAATGTGATCTGATCCGGTTTTTGCGGGAACATAGTCCTTGCTGGAAAGAA AAATGTCCAGCATATCCAACAGAGCTAGTATTTGCTCTGGACAATTCCTACGATGTCACAGAAGAGAGCT TTAATAAAACACGGGACATCATCACTTCCATTGTCAATGACCTTAACATCAGGGAAAATAACTGTCCTGT GGGAGCAAGAGTTGCCATGGTTTCCTATAACTCAGGCACCAGCTATCTCATCCGCTGGTCTGACTACAAT AGGAAGAAGCAGCTCCTCCAGCAGCTTTCCCAAATAAAATATCAAGACACCACAGAGCCCCGAGATGTTG GTAATGCAATGAGGTTTGTGACCCGCAACGTGTTCAAGCGGACGTATGCAGGAGCCAACGTGAGGAGAGT TGCTGTGTTTTTTAGCAATGGTCAAACAGCCAGTAGGTCATCCATCATCACGGCCACCATGGAGTTTAGT GCCCTGGATATCAGTCCAACAGTCTTTGCTTTTGATGAGAGAGTTTTCCTTGAAGCTTTTGGGTTTGACA ACACTGGAACATTTCAGGTGATTCCAGTTCCTCCAAATGGGGAAAATCAAACATTAGAAAGACTTCGGCG CTGTGCACTTTGCTATGATAAATGTTTTCCAAATGCTTGCATTCGAGAGGCTTTCTTACCTGAAGATTCA TACATGGATGTAGTCTTCCTCATAGACAATTCTCGGAATATAGCAAAGGATGAGTTTAAGGCTGTGAAAG CCTTGGTGAGCTCAGTGATTGACAACTTCAACATTGCTTCAGACCCTTTAATCTCAGACTCTGGTGATAG GATTGCTTTGTTGAGCTATTCTCCTTGGGAAAGTTCCAGGAGAAAGATGGGTACAGTAAAAACAGAGTTT GATTTCATCACTTATGACAACCAACTCCTAATGAAGAATCACATCCAGACTTCCTTCCAACAGCTAAATG GAGAAGCAACAATTGGTCGTGCCCTACTGTGGACCACTGAAAATCTTTTTCCAGAAACACCCTATCTAAG AAAACACAAGGTCATCTTTGTGGTCTCAGCTGGAGAAAATTATGAGAGAAAAGAATTTGTAAAAATGATG GCTTTGAGGGCTAAGTGTCAAGGCTACGTCATATTTGTGATTTCTCTGGGCTCTACACGTAAGGATGACA TGGAGGAGTTAGCCAGCTACCCACTTGATCAACACCTGATACAGCTTGGGAGAATACATAAACCAGATCT GAATTATATTGCGAAGTTCTTAAAGCCATTTTTATACTCGGTCAGGCGGGGATTCAATCAGTACCCACCA CCGATGCTTGAGGATGCCTGTAGACTCATCAATTTAGGAGGAGAGAATATTCAAAATGATGGTTTCCAAT TTGTTACTGAGCTACAAGAGGATTTTTTGGGAGGTAATGGCTTCATTGGCCAAGAATTAAATTCTGGGAG AGAATCACCTTTTGTAAAGACGGAAGACAATGGAAGTGACTATTTGGTTTACCTTCCAAGCCAAATGTTT GAGCCACAAAAATTAATGATCAATTATGAAAAAGATCAAAAATCTGCAGAAATTGCAAGTCTCACTTCTG GACATGAAAATTATGGCAGAAAAGAAGAACCAGATCATACTTATGAACCTGGAGATGTCTCTCTTCAAGA ATATTACATGGATGTGGCTTTCCTCATAGATGCTTCCCAAAGAGTAGGAAGTGATGAGTTTAAGGAAGTA AAAGCTTTTATAACCTCAGTGCTTGATTACTTTCACATTGCCCCCACTCCACTGACCTCCACCTTAGGAG ACAGGGTTGCTGTCCTGAGCTACTCTCCTCCAGGCTATATGCCTAACACTGAAGAATGCCCTGTCTACCT GGAATTTGATTTGGTTACTTATAACAGTATACACCAAATGAAACATCATCTCCAAGACTCTCAACAGCTC AATGGAGATGTTTTTATTGGCCATGCCTTGCAGTGGACAATTGACAATGTCTTTGTAGGAACCCCCAATC TGAGGAAAAACAAAGTTATCTTTGTAATATCTGCTGGCGAAACCAACTCTTTAGACAAAGACGTCTTAAG GAATGTGTCTCTGAGAGCCAAGTGTCAAGGCTACTCCATATTTGTGTTTTCCTTTGGCCCTAAACACAAT GACAAAGAATTAGAAGAATTAGCCAGCCACCCTCTGGATCATCACTTGGTCCAACTTGGCCGAACCCACA AGCCAGATTGGAACTATATCATCAAGTTTGTCAAGCCATTTGTCCATTTAATCAGACGTGCCATCAACAA ATATCCCACCGAAGATATGAAAGCCACATGTGTTAACATGACCTCTCCCAACCCAGAGAACGGTGGCACA GAAAACACTGTATTATGGTGA
Translation (2526 aa): MKILLIIFVLIIWTETLADQSPGPGPVYADVVFLVDSSDHLGPKSFPFVKTFINKMINSLPIEANKYRVA LAQYSDEFHSEFHLSTFKGRSPMLNHLKKNFQFIGGSLQIGKALQEAHRTYFSAPINGRDRKQFPPILVV LASAESEDEVEEASKALQKDGVKIISVGVQKASEENLKAMATSHFHFNLRTIRDLSTFSQNMTQIIKDVT KYKEGAVDADMQVHFPISCQKDSLADLVFLVDESLGTGGNLRHLQTFLENITSSMDVKENCMRLGLMSYS NSAKTISFLKSSTTQSEFQQQIKNLSIQVGKSNTGAAIDQMRRDGFSESYGSRRAQGVPQIAVLVTHRPS DDEVHDAALNLRLEDVNVFALSIQGANNTQLEEIVSYPPEQTISTLKSYADLETYSTKFLKKLQNEIWSQ ISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVRVGVVQYSDDT EVEFYITDYSNDIDLRKAIFNIKQLTGGTYTGKALDYILQIIKNGMKDRMSKVPCYLIVLTDGMSTDRVV EPAKRLRAEQITVHAVGIGAANKIELQEIAGKEERVSFGQNFDALKSIKNEVVREICAEKGCEDMKADIM FLVDSSWSIGNENFRKMKIFMKNLLTKIQIGADKTQIGVVQFSDKTKEEFQLNRYFTQQEISDAIDRMSL INEGTLTGKALNFVGQYFTHSKGARLGAKKFLILITDGVAQDDVRDPARILRGKDVTIFSVGVYNANRSQ LEEISGDSSLVFHVENFDHLKALERKLIFRVCALHDCKRITLLDVVFVLDHSGSIKKQYQDHMINLTIHL VKKADVGRDRVQFGALKYSDQPNILFYLNTYSNRSAIIENLRKRRDTGGNTYTAKALKHANALFTEEHGS RIKQNVKQMLIVITDGESHDHDQLNDTALELRNKGITIFAVGVGKANQKELEGMAGNKNNTIYVDNFDKL KDVFTLVQERMCTEAPEVCHLQEADVIFLCDGSDRVSNSDFVTMTTFLSDLIDNFDIQSQRMKIGMAQFG SNYQSIIELKNSLTKTQWKTQIQNVSKSGGFPRIDFALKKVSNMFNLHAGGRRNAGVPQTLVVITSGDPR YDVADAVKTLKDLGICVLVLGIGDVYKEHLLPITGNSEKIITFQDFDKLKNVDVKKRIIREICQSCGKTN CFMDIVVGFDISTHVQGQPLFQGHPQLESYLPGILEDISSIKGVSCGAGTEAQVSLAFKVNSDQGFPAKF QIYQKAVFDSLLQVNVSGPTHLNAQFLRSLWDTFKDKSASRGQVLLIFSDGLQSESNIMLENQSDRLREA GLDALLVVSLNTTAHHEFSSFEFGKRFDYRTHLTIGMRELGKKLSQYLGNIAERTCCCTFCKCPGIPGPH GTRGLQAMKGSQGLKGSRGHRGEDGNPGVRGDTGPQGDKGIAGCPGAWGQKGLKGFSGPKGGHGDDGIDG LDGEEGCHGFPGIKGEKGDPGSQGSPGSRGAPGQYGEKGFPGDPGNPGQNNNIKGQKGSKGEQGRQGRSG QKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGS PGLMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRGFPGDAGQKG DIGNPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPGQRGIKGMAGQPVYSQCDLIRFLREHSPCWKE KCPAYPTELVFALDNSYDVTEESFNKTRDIITSIVNDLNIRENNCPVGARVAMVSYNSGTSYLIRWSDYN RKKQLLQQLSQIKYQDTTEPRDVGNAMRFVTRNVFKRTYAGANVRRVAVFFSNGQTASRSSIITATMEFS ALDISPTVFAFDERVFLEAFGFDNTGTFQVIPVPPNGENQTLERLRRCALCYDKCFPNACIREAFLPEDS YMDVVFLIDNSRNIAKDEFKAVKALVSSVIDNFNIASDPLISDSGDRIALLSYSPWESSRRKMGTVKTEF DFITYDNQLLMKNHIQTSFQQLNGEATIGRALLWTTENLFPETPYLRKHKVIFVVSAGENYERKEFVKMM ALRAKCQGYVIFVISLGSTRKDDMEELASYPLDQHLIQLGRIHKPDLNYIAKFLKPFLYSVRRGFNQYPP PMLEDACRLINLGGENIQNDGFQFVTELQEDFLGGNGFIGQELNSGRESPFVKTEDNGSDYLVYLPSQMF EPQKLMINYEKDQKSAEIASLTSGHENYGRKEEPDHTYEPGDVSLQEYYMDVAFLIDASQRVGSDEFKEV KAFITSVLDYFHIAPTPLTSTLGDRVAVLSYSPPGYMPNTEECPVYLEFDLVTYNSIHQMKHHLQDSQQL NGDVFIGHALQWTIDNVFVGTPNLRKNKVIFVISAGETNSLDKDVLRNVSLRAKCQGYSIFVFSFGPKHN DKELEELASHPLDHHLVQLGRTHKPDWNYIIKFVKPFVHLIRRAINKYPTEDMKATCVNMTSPNPENGGT ENTVLW
|