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Report for CCDS14701.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14701.1 Public Homo sapiens X CNGA2 24 110 108 CCDS HistoryNCBI Gene:1260Re-query CCDS DB by CCDS ID:14701.1Re-query CCDS DB by GeneID:1260See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14701.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329903.5 ENSP00000328478.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329903.5Link to Ensembl Protein Viewer:ENSP00000328478.4Re-query CCDS DB by Nucleotide ID:ENST00000329903Re-query CCDS DB by Protein ID:ENSP00000328478
Original member Current member NCBI NM_005140.3 NP_005131.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005140.3Link to Protein Sequence:NP_005131.1Re-query CCDS DB by Nucleotide ID:NM_005140Re-query CCDS DB by Protein ID:NP_005131Link to BLAST:NP_005131.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005131.1 664 Q16280 664 100% 0 0

Chromosomal Locations for CCDS 14701.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 151738484 151738593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151738787 151738879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151739562 151739732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151740794 151740901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151742536 151742642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 151743093 151744498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1995 nt):
ATGACCGAAAAAACCAATGGTGTGAAGAGCTCCCCAGCCAATAATCACAACCATCATGCACCTCCTGCCA
TCAAGGCCAATGGCAAAGATGACCACAGGACAAGCAGCAGGCCACACTCTGCAGCTGACGATGACACCTC
CTCAGAACTGCAGAGGCTGGCAGACGTGGATGCCCCACAGCAGGGAAGGAGTGGCTTCCGCAGGATAGTT
CGCCTGGTGGGGATCATCAGAGAATGGGCCAACAAGAATTTCCGAGAGGAGGAACCTAGGCCTGACTCAT
TCCTCGAGCGTTTTCGTGGGCCTGAACTCCAGACTGTGACCACACAGGAGGGGGATGGCAAAGGCGACAA
GGATGGCGAGGACAAAGGCACCAAGAAGAAATTTGAACTATTTGTCTTGGACCCAGCTGGGGATTGGTAC
TACTGCTGGCTATTTGTCATTGCCATGCCCGTCCTTTACAACTGGTGCCTGCTGGTGGCCAGAGCCTGCT
TCAGTGACCTACAGAAAGGCTACTACCTGGTGTGGCTGGTGCTGGATTATGTCTCAGATGTGGTCTACAT
TGCGGACCTCTTCATCCGATTGCGCACAGGTTTCCTGGAGCAGGGGCTGCTGGTCAAAGATACCAAGAAA
CTGCGAGACAACTACATCCACACCCTGCAGTTCAAGCTGGATGTGGCTTCCATCATCCCCACTGACCTGA
TCTATTTTGCTGTGGACATCCACAGCCCTGAGGTGCGCTTCAACCGCCTGCTGCACTTTGCCCGCATGTT
TGAGTTCTTTGACCGGACAGAGACACGCACCAACTACCCTAACATCTTCCGCATCAGCAACCTTGTCCTC
TACATCTTGGTCATCATCCACTGGAATGCCTGCATCTATTATGCCATCTCCAAATCCATAGGCTTTGGGG
TCGACACCTGGGTTTACCCAAACATCACTGACCCTGAGTATGGCTACCTGGCTAGGGAATACATCTATTG
CCTTTACTGGTCCACACTGACTCTCACTACCATTGGGGAGACACCACCCCCTGTAAAGGATGAGGAGTAC
CTATTTGTCATCTTTGACTTCCTGATTGGCGTCCTCATCTTTGCCACCATCGTGGGAAATGTGGGCTCCA
TGATCTCCAACATGAATGCCACCCGGGCAGAGTTCCAGGCTAAGATCGATGCCGTGAAACACTACATGCA
GTTCCGAAAGGTCAGCAAGGGGATGGAAGCCAAGGTCATTAGGTGGTTTGACTACTTGTGGACCAATAAG
AAGACAGTGGATGAGCGAGAAATTCTCAAGAATCTGCCAGCCAAGCTCAGGGCTGAGATAGCCATCAATG
TCCACTTGTCCACACTCAAGAAAGTGCGCATCTTCCATGATTGTGAGGCTGGCCTGCTGGTAGAGCTGGT
ACTGAAACTCCGTCCTCAGGTCTTCAGTCCTGGGGATTACATTTGCCGCAAAGGGGACATCGGCAAGGAG
ATGTACATCATTAAGGAGGGCAAACTGGCAGTGGTGGCTGATGATGGTGTGACTCAGTATGCTCTGCTGT
CGGCTGGAAGCTGCTTTGGCGAGATCAGTATCCTTAACATTAAGGGCAGTAAAATGGGCAATCGACGCAC
AGCTAATATCCGCAGCCTGGGCTACTCAGATCTCTTCTGCTTGTCCAAGGATGATCTTATGGAAGCTGTG
ACTGAGTACCCTGATGCCAAGAAAGTCCTAGAAGAGAGGGGTCGGGAGATCCTCATGAAGGAGGGACTGC
TGGATGAGAACGAAGTGGCAACCAGCATGGAGGTCGACGTGCAGGAGAAGCTAGGGCAGCTGGAGACCAA
CATGGAAACCTTGTACACTCGCTTTGGCCGCCTGCTGGCTGAGTACACGGGGGCCCAGCAGAAGCTCAAG
CAGCGCATCACAGTTCTGGAAACCAAGATGAAACAGAACAATGAAGATGACTACCTGTCTGATGGGATGA
ACAGCCCTGAGCTGGCTGCTGCTGACGAGCCATAA

Translation (664 aa):
MTEKTNGVKSSPANNHNHHAPPAIKANGKDDHRTSSRPHSAADDDTSSELQRLADVDAPQQGRSGFRRIV
RLVGIIREWANKNFREEEPRPDSFLERFRGPELQTVTTQEGDGKGDKDGEDKGTKKKFELFVLDPAGDWY
YCWLFVIAMPVLYNWCLLVARACFSDLQKGYYLVWLVLDYVSDVVYIADLFIRLRTGFLEQGLLVKDTKK
LRDNYIHTLQFKLDVASIIPTDLIYFAVDIHSPEVRFNRLLHFARMFEFFDRTETRTNYPNIFRISNLVL
YILVIIHWNACIYYAISKSIGFGVDTWVYPNITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEY
LFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKGMEAKVIRWFDYLWTNK
KTVDEREILKNLPAKLRAEIAINVHLSTLKKVRIFHDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKE
MYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAV
TEYPDAKKVLEERGREILMKEGLLDENEVATSMEVDVQEKLGQLETNMETLYTRFGRLLAEYTGAQQKLK
QRITVLETKMKQNNEDDYLSDGMNSPELAAADEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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