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Report for CCDS45180.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45180.1 Public Homo sapiens 14 TEDC1 24 110 108 CCDS HistoryNCBI Gene:283643Re-query CCDS DB by CCDS ID:45180.1Re-query CCDS DB by GeneID:283643See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45180.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392527.5 ENSP00000376312.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392527.5Link to Ensembl Protein Viewer:ENSP00000376312.1Re-query CCDS DB by Nucleotide ID:ENST00000392527Re-query CCDS DB by Protein ID:ENSP00000376312
Original member Current member NCBI NM_001134877.1 NP_001128349.1 Accepted alive Link to Nucleotide Sequence:NM_001134877.1Link to Protein Sequence:NP_001128349.1Re-query CCDS DB by Nucleotide ID:NM_001134877Re-query CCDS DB by Protein ID:NP_001128349Link to BLAST:NP_001128349.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128349.1 352 Q86SX3-5 352 100% 0 0

Chromosomal Locations for CCDS 45180.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 105491103 105491126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105491622 105491700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105492107 105492309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105492579 105492734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105497357 105497443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105497798 105497977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105498617 105498946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGTCCGGCCAGCGCGGTGATTGGACCTCCGCGCTCTGGCAGCTCCTCTTCCGTGTGCTCTCGCCACTCC
CTGCGGGCAACGCCTTGGCATCGCTCGCCCTGGAGGTCCAAGCCCGCTTGGTGAAGTCAGCACTATGCTC
CCAGGGCTACCCGAGGCTGGCACTGGCACAACTACCTGAGGATGGCTCGCAGGGCAGTCGGGAGCTGCTG
CTGGCTCTGTCCTGGCTCTTGGCCCGAGGACCTGTGCCCGAGCAGATGCTGGCCCAGGCCCGAGTGCCTC
TGGGTGACGAGATGACTGTGTGCCAGTGTGAGGCCCTGGCCAGCCCTGGCCCACCTGCACCCCACATGGA
AGCAGAGGGTCCTGTGGATGTCCGCCATGTGCAGTGGCTGATGGGAAAGCTGCGGTTCCGGTGGCGCCAG
CTGGTGTCCAGTCAGCAGGAGCAGTGCGCCCTCCTGAGCAAGCTGCTGCGGACTCTGGAGCGTGAGAACC
AGCGCCTGGAGGCTGTCCTGGCGTGGCGGCGCTCTGAGCTGGTCTTCTGGCGGTGGATGGACACGGTCCT
GGGCACCTGTGCCCCGGAGGTGCCTGCTGCAGCCTCACAGCCCACCTTCCTGCCCTGGGTCCCCGAGCGC
GGGGGTGGCGAGTTGGACCTGGTAGTGCGGGAGCTGCAGGCACTGGAGGAGGAGCTGCGGGAGGCTGCGG
AGCGCAGGCGGGCGGCCTGGGAGGCCAAGGCTGGAGGCTGTGGACGGGGGCCAGAGTGGAGTGCCGCGCG
GCGGGCCTCTCGGGAGGCTGTGGAAAAGGAGCTGGGAGCTCTACAGCAGTGCTGGGAGCGAGACGGTGGC
CCGGCCCAGCCCCATGGGCCACACCGGCTGGTGAGACGAGAGGATGGGGCAGCAGGGGACCGGGACCTGC
GGGCAGCTGTGGTGATCAGGACGCTGAGGAGCCAGGAGGCCTGCCTGGAGGCGGTGCTACGTCGACTACA
GGGACAGTGTCGGCAGGAACTGGCCAGGCTGGTGGGAGCCCGCCCTGGTCTCATCTGGATCCCGCCACCT
GGACGCTGA

Translation (352 aa):
MSGQRGDWTSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELL
LALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQ
LVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPER
GGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGG
PAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPP
GR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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