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Report for CCDS92463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92463.1 Public Homo sapiens 18 STARD6 24 110 108 CCDS HistoryNCBI Gene:147323Re-query CCDS DB by CCDS ID:92463.1Re-query CCDS DB by GeneID:147323See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92463.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000686109.1 ENSP00000510350.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686109.1Link to Ensembl Protein Viewer:ENSP00000510350.1Re-query CCDS DB by Nucleotide ID:ENST00000686109Re-query CCDS DB by Protein ID:ENSP00000510350
Original member Current member NCBI NM_001394379.1 NP_001381308.1 Accepted alive Link to Nucleotide Sequence:NM_001394379.1Link to Protein Sequence:NP_001381308.1Re-query CCDS DB by Nucleotide ID:NM_001394379Re-query CCDS DB by Protein ID:NP_001381308Link to BLAST:NP_001381308.1

Chromosomal Locations for CCDS 92463.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 54324692 54324875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54329347 54329440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54331742 54331859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54337125 54337251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54354054 54354136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 54354484 54354573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (696 nt):
ATGGACTTCAAGGCAATTGCCCAACAAACTGCCCAAGAAGTTTTAGGTTATAATCGAGATACATCAGGCT
GGAAAGTGGTTAAAACTTCACTAATTATTTGTGGATTTTTATTCCCCTTTGAGAAAAAGATAACTGTTTC
CAGTAAGGCTTCTAGAAAATTCCATGGAAATCTATATCGTGTTGAAGGGATAATTCCAGAATCACCAGCT
AAACTATCTGATTTCCTCTACCAAACTGGAGACAGAATTACATGGGATAAATCATTGCAAGTGTATAATA
TGGTACACAGGATTGATTCGGACACATTCATATGTCATACCATTACACAAAGTTTTGCCGTGGGCTCCAT
TTCCCCTCGAGACTTTATCGACTTAGTGTACATCAAGCGCTACGAAGGAAATATGAACATTATCAGTTCT
AAAAGTGTGGATTTTCCAGAATATCCTCCATCTTCAAATTATATCCGCGGTTATAACCATCCTTGTGGCT
TTGTATGTTCACCAATGGAAGAAAACCCAGCATATTCCAAACTAGTGATGTTTGTCCAGACAGAAATGAG
AGGAAAATTGTCCCCATCAATAATTGAAAAAACCATGCCTTCCAACTTAGTAAACTTCATCCTCAATGCA
AAAGATGGAATAAAGGCACACAGAACTCCATCAAGACGTGGATTTCATCATAATAGTCATTCATGA

Translation (231 aa):
MDFKAIAQQTAQEVLGYNRDTSGWKVVKTSLIICGFLFPFEKKITVSSKASRKFHGNLYRVEGIIPESPA
KLSDFLYQTGDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRYEGNMNIISS
KSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLSPSIIEKTMPSNLVNFILNA
KDGIKAHRTPSRRGFHHNSHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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