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Report for CCDS91035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91035.1 Public Homo sapiens 1 NOTCH2NLA 24 110 108 CCDS HistoryNCBI Gene:388677Re-query CCDS DB by CCDS ID:91035.1Re-query CCDS DB by GeneID:388677See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91035.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000689750.1 ENSP00000508632.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000689750.1Link to Ensembl Protein Viewer:ENSP00000508632.1Re-query CCDS DB by Nucleotide ID:ENST00000689750Re-query CCDS DB by Protein ID:ENSP00000508632
Original member Current member EBI ENST00000688759.1 ENSP00000508786.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000688759.1Link to Ensembl Protein Viewer:ENSP00000508786.1Re-query CCDS DB by Nucleotide ID:ENST00000688759Re-query CCDS DB by Protein ID:ENSP00000508786
Original member Current member NCBI NM_001395232.1 NP_001382161.1 Accepted alive Link to Nucleotide Sequence:NM_001395232.1Link to Protein Sequence:NP_001382161.1Re-query CCDS DB by Nucleotide ID:NM_001395232Re-query CCDS DB by Protein ID:NP_001382161Link to BLAST:NP_001382161.1

Chromosomal Locations for CCDS 91035.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 146156292 146156815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146164751 146165010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146189300 146189337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGTGTGTTACCTACCACAATGGCACAGGATACTGCAAATGTCCAGAAGGCTTCTTGGGGGAATATTGTC
AACATCGAGACCCCTGTGAGAAGAACCGCTGCCAGAATGGTGGGACTTGTGTGGCCCAGGCCATGCTGGG
GAAAGCCACGTGCCGATGTGCCTCAGGGTTTACAGGAGAGGACTGCCAGTACTCGACATCTCATCCATGC
TTTGTGTCTCGACCTTGCCTGAATGGCGGCACATGCCATATGCTCAGCCGGGATACCTATGAGTGCACCT
GTCAAGTCGGGTTTACAGGTAAGGAGTGCCAATGGACCGATGCCTGCCTGTCTCATCCCTGTGCAAATGG
AAGTACCTGTACCACTGTGGCCAACCAGTTCTCCTGCAAATGCCTCACAGGCTTCACAGGGCAGAAGTGT
GAGACTGATGTCAATGAGTGTGACATTCCAGGACACTGCCAGCATGGTGGCACCTGCCTCAACCTGCCTG
GTTCCTACCAGTGCCAGTGCCTTCAGGGCTTCACAGGCCAGTACTGTGACAGCCTGTATGTGCCCTGTGC
ACCCTCGCCTTGTGTCAATGGAGGCACCTGTCGGCAGACTGGTGACTTCACTTTTGAGTGCAACTGCCTT
CCAGGTAAGGAGCTCCCTAGTGTCCCAGGATTAGGGGACAAACCCCTAGCACAGGAGGTAGTGGGTGTGG
CTCAATTGCTTTTTTTAGGAAGCGCAAGGAAAAAGGGAAGTGAGAATTTTGTGTGGGGTGGGTTGCTAGT
GAGGGAGGAGTTTTATGGGCCCACTGTGGTCCATAAACTGAGCAGGGGATAA

Translation (273 aa):
MCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPC
FVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKC
ETDVNECDIPGHCQHGGTCLNLPGSYQCQCLQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCL
PGKELPSVPGLGDKPLAQEVVGVAQLLFLGSARKKGSENFVWGGLLVREEFYGPTVVHKLSRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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