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Report for CCDS12197.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12197.1 Public Homo sapiens 19 CERS4 24 110 108 CCDS HistoryNCBI Gene:79603Re-query CCDS DB by CCDS ID:12197.1Re-query CCDS DB by GeneID:79603See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12197.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251363.10 ENSP00000251363.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251363.10Link to Ensembl Protein Viewer:ENSP00000251363.5Re-query CCDS DB by Nucleotide ID:ENST00000251363Re-query CCDS DB by Protein ID:ENSP00000251363
Original member Current member EBI ENST00000559450.5 ENSP00000453509.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559450.5Link to Ensembl Protein Viewer:ENSP00000453509.1Re-query CCDS DB by Nucleotide ID:ENST00000559450Re-query CCDS DB by Protein ID:ENSP00000453509
Original member Current member NCBI NM_024552.3 NP_078828.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024552.3Link to Protein Sequence:NP_078828.2Re-query CCDS DB by Nucleotide ID:NM_024552Re-query CCDS DB by Protein ID:NP_078828Link to BLAST:NP_078828.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078828.2 394 Q9HA82 394 100% 0 0

Chromosomal Locations for CCDS 12197.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 8251077 8251249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8254499 8254616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8255607 8255725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8255822 8255879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8256236 8256286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8256618 8256710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8256949 8257077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8257879 8257985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8261688 8261844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8261930 8262109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGCTGTCCAGTTTCAACGAGTGGTTTTGGCAGGACAGGTTCTGGTTACCACCCAATGTCACGTGGACAG
AGCTAGAAGACCGGGATGGCCGTGTCTACCCCCACCCCCAGGACTTGTTGGCAGCCCTGCCCCTGGCGCT
GGTCCTCCTGGCCATGCGCCTTGCCTTTGAGAGATTCATTGGCCTGCCCCTGAGCCGGTGGCTGGGTGTG
AGGGATCAGACCAGGAGGCAAGTGAAGCCCAACGCCACGCTGGAGAAACACTTCCTCACGGAAGGGCACA
GGCCCAAGGAGCCCCAGCTGTCTCTCCTGGCCGCCCAGTGTGGCCTCACGCTGCAGCAGACCCAGCGATG
GTTCCGGAGACGCCGGAACCAGGATCGACCCCAGCTGACCAAGAAGTTCTGTGAGGCCAGCTGGAGGTTT
CTCTTCTACCTGTCCTCCTTCGTGGGCGGCCTCTCGGTCCTGTACCACGAGTCATGGCTGTGGGCACCAG
TAATGTGCTGGGACAGGTACCCAAACCAGACTCTGAAGCCATCCCTGTACTGGTGGTACCTCTTGGAGCT
GGGTTTCTACCTCTCACTGCTAATCAGGCTGCCCTTTGATGTCAAGCGCAAGGATTTCAAGGAGCAGGTG
ATACACCACTTCGTGGCGGTCATCCTGATGACCTTCTCCTACAGTGCCAACCTGCTGCGCATTGGCTCTC
TGGTGCTGCTGTTACACGATTCCTCTGACTACCTGCTGGAGGCCTGTAAGATGGTCAACTACATGCAGTA
TCAGCAAGTGTGCGACGCTCTCTTCCTCATCTTCTCCTTTGTCTTCTTCTACACCCGACTGGTCCTCTTT
CCCACCCAGATCCTCTACACCACATACTACGAGTCCATCAGCAACAGGGGCCCCTTCTTCGGCTACTACT
TCTTCAACGGGCTTCTGATGTTGCTGCAGCTGCTGCACGTGTTCTGGTCTTGCCTCATTCTGCGCATGCT
CTATAGCTTCATGAAGAAGGGCCAGATGGAGAAGGACATTCGTAGTGATGTAGAAGAATCAGACTCCAGT
GAGGAGGCGGCGGCGGCCCAGGAACCTCTGCAGCTAAAGAACGGGGCAGCTGGAGGGCCCAGGCCAGCCC
CCACTGATGGCCCTCGGAGCCGGGTGGCCGGGCGTCTGACCAACAGGCACACAACAGCCACATAG

Translation (394 aa):
MLSSFNEWFWQDRFWLPPNVTWTELEDRDGRVYPHPQDLLAALPLALVLLAMRLAFERFIGLPLSRWLGV
RDQTRRQVKPNATLEKHFLTEGHRPKEPQLSLLAAQCGLTLQQTQRWFRRRRNQDRPQLTKKFCEASWRF
LFYLSSFVGGLSVLYHESWLWAPVMCWDRYPNQTLKPSLYWWYLLELGFYLSLLIRLPFDVKRKDFKEQV
IHHFVAVILMTFSYSANLLRIGSLVLLLHDSSDYLLEACKMVNYMQYQQVCDALFLIFSFVFFYTRLVLF
PTQILYTTYYESISNRGPFFGYYFFNGLLMLLQLLHVFWSCLILRMLYSFMKKGQMEKDIRSDVEESDSS
EEAAAAQEPLQLKNGAAGGPRPAPTDGPRSRVAGRLTNRHTTAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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