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Report for CCDS45673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45673.1 Public Homo sapiens 17 KRTAP4-7 24 110 108 CCDS HistoryNCBI Gene:100132476Re-query CCDS DB by CCDS ID:45673.1Re-query CCDS DB by GeneID:100132476See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45673.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391417.6 ENSP00000375236.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000391417.6Link to Ensembl Protein Viewer:ENSP00000375236.4Re-query CCDS DB by Nucleotide ID:ENST00000391417Re-query CCDS DB by Protein ID:ENSP00000375236
Original member Current member NCBI NM_033061.4 NP_149050.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033061.4Link to Protein Sequence:NP_149050.3Re-query CCDS DB by Nucleotide ID:NM_033061Re-query CCDS DB by Protein ID:NP_149050Link to BLAST:NP_149050.3

Chromosomal Locations for CCDS 45673.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41084207 41084674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (468 nt):
ATGGTCAGCTCCTGTTGTGGCTCCGTGTGCTCTGACCAGGGCTGCAGCCAAGACCTCTGTCAGGAGACCT
GCTGCCGCCCCAGCTGCTGTCAGACCACCTGTTGCAGGACCACCTGCTACCGCCCCAGCTGTTGTGTGTC
CAGCTGCTGCAGGCCCCAGTGCTGCCAGTCTGTGTGCTGCCAACCCACCTGCTGTCGCCCCACCTGCTGT
GAGACGACCTGCTGCCACCCTAGGTGCTGCATCTCCAGCTGCTGCCGCCCCAGCTGCTGTATGTCCAGCT
GCTGCAAGCCCCAGTGCTGCCAGTCTGTGTGCTGCCAGCCCACCTGCTGCCGCCCCAGCTGCTGCCGCCC
CTGCTGCTGCCTGCGTCCAGTCTGTGGCCGAGTCTCCTGCCACACCACTTGCTATCGCCCAACCTGTGTC
ATCTCCACCTGTCCCCGCCCCTTGTGCTGTGCCTCCTCTTGCTGCTGA

Translation (155 aa):
MVSSCCGSVCSDQGCSQDLCQETCCRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQSVCCQPTCCRPTCC
ETTCCHPRCCISSCCRPSCCMSSCCKPQCCQSVCCQPTCCRPSCCRPCCCLRPVCGRVSCHTTCYRPTCV
ISTCPRPLCCASSCC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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