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Report for CCDS93665.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93665.1 Public Homo sapiens 4 GK3 24 110 108 CCDS HistoryNCBI Gene:2713Re-query CCDS DB by CCDS ID:93665.1Re-query CCDS DB by GeneID:2713See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93665.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000505354.3 ENSP00000489687.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000505354.3Link to Ensembl Protein Viewer:ENSP00000489687.1Re-query CCDS DB by Nucleotide ID:ENST00000505354Re-query CCDS DB by Protein ID:ENSP00000489687
Original member Current member NCBI NM_001395953.1 NP_001382882.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395953.1Link to Protein Sequence:NP_001382882.1Re-query CCDS DB by Nucleotide ID:NM_001395953Re-query CCDS DB by Protein ID:NP_001382882Link to BLAST:NP_001382882.1

Chromosomal Locations for CCDS 93665.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 165277984 165279645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1662 nt):
ATGGCAGCCTCAAAGAAGGCAGTTTTGGGGCCATTGGTGGGGGCAGTGGACCAAGGCACCAGTTCCACGC
GCTTTTTGGTTTTCAATTCAAGAACAGCTGAACTACTTAGTCATCATCAAGTGGAAATAAAACAAGAGTT
CCCAAGAGAAGGATGGGTGGAACAGGACCCTAAGGAAATTCTACATTCTGTCTATGAGTGTATAGAGAAA
ACATGTGAGAAACTTGGACAGCTCAATATTGGTATTTCCAACATAAAAGCTATTGGTGTCAGCAACCAGA
GGGAAACCACCGTAGTCTGGGACAAGATAACTGGAGAGCCTCTCTACAATGCTGTGGTGTGGCTTGATCT
AAGAACACAGTCTACCGTTGAGAGTCTTAGTAAAAGAATTCCAGGAAATAATAACTTTGTCAAGTCCAAG
ACAGGCCTTCCACTTAGCACTTACTTCAGTGCAGTGAAACTTCGCTGGCTCCTCGACAATGTGAGAAAAG
TTCAAAAGGCCGTTGAAGAAAAACGAGCTCTTTTTGGGACTATTGATTCATGGCTTATTTGGAGTTTGAC
AGGAGGCGTCAATGGAGGTGTCCACTGTACAGATGTAACAAATGCAAGTAGGACTATGCTTTTCAACATT
CATTCTTTGGAATGGGATAAACAACTCTGTGAATTTTTTGGAATTCCAATGGAAATTCTTCCACATGTTC
GGAGTTCTTCTGAGATCTATGGCCTAATGAAAGCGGGGGCCTTGGAAGGTGTGCCAATATCTGGGTGTTT
AGGGGACCAGTCTGCTGCACTGGTGGGACAAATGTGCTTCCAGATTGGACAAGCCAAAAATACGTATGGA
ACAGGATGTTTCTTACTATGTAATACAGGCCATAAGTGTGTATTTTCTGATCATGGCCTTCTCACCACAG
TGGCTTACAAACTTGGCAGAGACAAACCGGTATATTACGCTTTGGAAGGTTCTGTAGCTATAGCTGGTGC
TGTTATTCGCTGGCTAAGAGACAATCTTGGAATTATAAAGACCTCAGAAGAAATTGAAAAACTTGCTAAA
GAAGTAGGTACTTCTTATGGCTGCTACTTCGTCCCAGCATTTTCGGGGTTATATGCACCTTATTGGGAGC
CCAGCGCAAGAGGGATAATCTGTGGACTCACTCAATTCACGAATAAATGCCATATTGCTTTTGCTGCATT
AGAAGCTGTTTGTTTCCAAACTCGAGAGATTTTGGATGCCATGAATCGAGACTGTGGAATTCCACTCAGT
CATTTGCAGGTTGATGGAGGAATGACCAGCAACAAAATTCTTATGCAGCTACAAGCAGACATTCTGTATA
TTCCAGTAGTGAAGCCCTTGATGCCCGAAACCACTGCACTGGGTGCTGCCATGGCGGCAGGGGCTGCAGA
AGGAGTCGACGTATGGAGTCTTGAACCTGAGGATTTGTCCGCCGTCACGATGGAGCGGTTTGAACCTCAG
ATTAATGCTGAGGAAAGTGAAATTCGTTATTCTACATGGAAGAAAGCTGTGATGAAGTCAATGGGTTGGG
TTACAACTCAATCTCCAGAAGGTGGTGACCCTAGTGTCTTCTGTAGTCTGCCCTTGGGCTTTTTTATAGT
GAGTAGCATGGCAATGTTAATCGGAGCAAGGTACATCTCAGGTATTCCATAA

Translation (553 aa):
MAASKKAVLGPLVGAVDQGTSSTRFLVFNSRTAELLSHHQVEIKQEFPREGWVEQDPKEILHSVYECIEK
TCEKLGQLNIGISNIKAIGVSNQRETTVVWDKITGEPLYNAVVWLDLRTQSTVESLSKRIPGNNNFVKSK
TGLPLSTYFSAVKLRWLLDNVRKVQKAVEEKRALFGTIDSWLIWSLTGGVNGGVHCTDVTNASRTMLFNI
HSLEWDKQLCEFFGIPMEILPHVRSSSEIYGLMKAGALEGVPISGCLGDQSAALVGQMCFQIGQAKNTYG
TGCFLLCNTGHKCVFSDHGLLTTVAYKLGRDKPVYYALEGSVAIAGAVIRWLRDNLGIIKTSEEIEKLAK
EVGTSYGCYFVPAFSGLYAPYWEPSARGIICGLTQFTNKCHIAFAALEAVCFQTREILDAMNRDCGIPLS
HLQVDGGMTSNKILMQLQADILYIPVVKPLMPETTALGAAMAAGAAEGVDVWSLEPEDLSAVTMERFEPQ
INAEESEIRYSTWKKAVMKSMGWVTTQSPEGGDPSVFCSLPLGFFIVSSMAMLIGARYISGIP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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