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Report for CCDS27203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27203.1 Public Mus musculus 14 Mtmr9 23 108 98 CCDS HistoryNCBI Gene:210376Re-query CCDS DB by CCDS ID:27203.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058679.6 ENSMUSP00000059894.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058679.6Link to Ensembl Protein Viewer:ENSMUSP00000059894.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000058679Re-query CCDS DB by Protein ID:ENSMUSP00000059894
Original member Current member NCBI NM_177594.1 NP_808262.1 Accepted alive Link to Nucleotide Sequence:NM_177594.1Link to Protein Sequence:NP_808262.1Re-query CCDS DB by Nucleotide ID:NM_177594Re-query CCDS DB by Protein ID:NP_808262Link to BLAST:NP_808262.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808262.1 545 Q9Z2D0 545 100% 0 0

Chromosomal Locations for CCDS 27203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 63524066 63524217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63526791 63526942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63528111 63528331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63529725 63529866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63530188 63530349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63534327 63534544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63536992 63537165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63540254 63540379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63542348 63542456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63543458 63543639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1638 nt):
ATGGAGTTTGCGGAGCTGATTAAAACCCCACGGGTAGACAATGTGGTGCTGCACCGGCCTTTCTACACCG
CCGTGGAAGGGACCCTGTGTCTGACAGGCCACCACCTGATCCTGTCTTCCCGGCAGGACAACACGGAGGA
GCTCTGGCTCCTCCATTCAAATATCGACGCCATCGACAAACGATTTGTGGGCTCTCTGGGTACCATCATC
ATAAAATGTAAAGATTTCCGAATCATTCAGTTGGATATTCCTGGAATGGAGGAGTGTTTAAATATAGCCA
GTTCCATTGAGGCATTGTCCACTCTGGACTCGGTCACCCTGATGTACCCTTTCTTCTACCGACCCATGTT
TGAAGTGATTGAAGATGGCTGGCATTCTTTCCTTCCTGAGCAAGAATTTGAGTTCTACTCTTCTGCTACC
AGTGAATGGAGACTGAGCTATATCAATAAGGACTTTTCTATCTGTCCTTCCTACCCACCAACTGTCATTG
TGCCCAAGTCCGTCGATGACGAAGCACTTCGGAAGGTAGCAGCCTTCCGACATGGGGGGCGCTTCCCAGT
CCTGAGCTATTACCATAAAAAGAATGGCATGGTGATTATGCGAAGTGGTCAGCCCCTGACCGGCACAAAC
GGGAGGAGGTGCAAGGAAGACGAGAAGCTGATAAATGCCACCCTCAGGGCAGGAAAGCGTGGCTACCTTA
TTGACACCAGATCCCTAAATGTGGCCCAGCAAGCTAGAGCCAAAGGAGGTGGCTTTGAACAGGAGGCTCA
TTATCCCCAGTGGAGGCGGATTCACAAGTCCATTGAGAGATACCATGTTCTTCAGGAGAGCCTAATCAAA
CTCGTGGAAGCATGTAATGAACAAACCCACAACATGGACCGGTGGCTCGGCAAGTTGGAGGCCTCCAATT
GGCTGACACACATCAAGGAGATTCTGACCACCGCCTGCCTGGCGGCCCAGTGCATTGACAGGGAAGGTGC
ATCAGTGTTGATTCATGGGACAGAAGGAACTGATTCCACACTGCAGGTGACTTCTCTGGCCCAGATCATC
CTGGAACCAAGAAGCAGGACCATCCGAGGCTTTGAGGCCCTGATAGAGAGGGAGTGGCTGCAGGCTGGTC
ACCCATTCCAACAGCGCTGTGCACAGTCAGCCTATTGCAGCAGCAAGCAGAAGTGGGAGGCCCCCGTGTT
TCTTCTCTTCCTGGACTGCGTGTGGCAGATCCTCCGGCAGTTCCCTTGCTCCTTCGAGTTTAATGAGCAT
TTTCTCATCATGCTCTTTGAGCATGCTTATGCCTCACAGTTCGGGACATTCCTGGGCAACAATGAAAGTG
AAAGATGTAAGTTGAAGCTACAACAGAAAACAATGTCTTTGTGGTCATGGGTCAATCGGCCCGGCGAGCT
GAGTAAGTTCACCAATCCACTCTTTGAAGCCAACAACCTGGTCATCTGGCCTTCTGTGGCGCCACAGAGT
CTTCAGCTGTGGGAAGGAATCTTCTTACGCTGGAGCAGATCCTCCAAGTATCTGGATGAAGCATATGAGG
AAATGGTTAACATCATTGAATATAACAAGGAGTTACAAGCCAAGGTCAATGTCCTGAGAAGGCAGTTGGC
TGAATTGGAAACAGAGGATGGGCTATGA

Translation (545 aa):
MEFAELIKTPRVDNVVLHRPFYTAVEGTLCLTGHHLILSSRQDNTEELWLLHSNIDAIDKRFVGSLGTII
IKCKDFRIIQLDIPGMEECLNIASSIEALSTLDSVTLMYPFFYRPMFEVIEDGWHSFLPEQEFEFYSSAT
SEWRLSYINKDFSICPSYPPTVIVPKSVDDEALRKVAAFRHGGRFPVLSYYHKKNGMVIMRSGQPLTGTN
GRRCKEDEKLINATLRAGKRGYLIDTRSLNVAQQARAKGGGFEQEAHYPQWRRIHKSIERYHVLQESLIK
LVEACNEQTHNMDRWLGKLEASNWLTHIKEILTTACLAAQCIDREGASVLIHGTEGTDSTLQVTSLAQII
LEPRSRTIRGFEALIEREWLQAGHPFQQRCAQSAYCSSKQKWEAPVFLLFLDCVWQILRQFPCSFEFNEH
FLIMLFEHAYASQFGTFLGNNESERCKLKLQQKTMSLWSWVNRPGELSKFTNPLFEANNLVIWPSVAPQS
LQLWEGIFLRWSRSSKYLDEAYEEMVNIIEYNKELQAKVNVLRRQLAELETEDGL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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