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Report for CCDS12007.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12007.1 Public Homo sapiens 18 CNDP1 24 110 108 CCDS HistoryNCBI Gene:84735Re-query CCDS DB by CCDS ID:12007.1Re-query CCDS DB by GeneID:84735See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12007.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358821.8 ENSP00000351682.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358821.8Link to Ensembl Protein Viewer:ENSP00000351682.3Re-query CCDS DB by Nucleotide ID:ENST00000358821Re-query CCDS DB by Protein ID:ENSP00000351682
Original member Current member NCBI NM_032649.6 NP_116038.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032649.6Link to Protein Sequence:NP_116038.4Re-query CCDS DB by Nucleotide ID:NM_032649Re-query CCDS DB by Protein ID:NP_116038Link to BLAST:NP_116038.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116038.4 507 Q96KN2 507 100% 0 0

Chromosomal Locations for CCDS 12007.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 74534668 74534691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74556338 74556466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74559323 74559472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74560856 74561018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74562047 74562135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74567233 74567433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74571186 74571270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74576869 74577029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74578163 74578327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74580130 74580271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74583561 74583708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74584496 74584562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGGATCCCAAACTCGGGAGAATGGCTGCGTCCCTGCTGGCTGTGCTGCTGCTGCTGCTGGAGCGCGGCA
TGTTCTCCTCACCCTCCCCGCCCCCGGCGCTGTTAGAGAAAGTCTTCCAGTACATTGACCTCCATCAGGA
TGAATTTGTGCAGACGCTGAAGGAGTGGGTGGCCATCGAGAGCGACTCTGTCCAGCCTGTGCCTCGCTTC
AGACAAGAGCTCTTCAGAATGATGGCCGTGGCTGCGGACACGCTGCAGCGCCTGGGGGCCCGTGTGGCCT
CGGTGGACATGGGTCCTCAGCAGCTGCCCGATGGTCAGAGTCTTCCAATACCTCCCGTCATCCTGGCCGA
ACTGGGGAGCGATCCCACGAAAGGCACCGTGTGCTTCTACGGCCACTTGGACGTGCAGCCTGCTGACCGG
GGCGATGGGTGGCTCACGGACCCCTATGTGCTGACGGAGGTAGACGGGAAACTTTATGGACGAGGAGCGA
CCGACAACAAAGGCCCTGTCTTGGCTTGGATCAATGCTGTGAGCGCCTTCAGAGCCCTGGAGCAAGATCT
TCCTGTGAATATCAAATTCATCATTGAGGGGATGGAAGAGGCTGGCTCTGTTGCCCTGGAGGAACTTGTG
GAAAAAGAAAAGGACCGATTCTTCTCTGGTGTGGACTACATTGTAATTTCAGATAACCTGTGGATCAGCC
AAAGGAAGCCAGCAATCACTTACGGAACCCGGGGGAACAGCTACTTCATGGTGGAGGTGAAATGCAGAGA
CCAGGATTTTCACTCAGGAACCTTTGGTGGCATCCTTCATGAACCAATGGCTGATCTGGTTGCTCTTCTC
GGTAGCCTGGTAGACTCGTCTGGTCATATCCTGGTCCCTGGAATCTATGATGAAGTGGTTCCTCTTACAG
AAGAGGAAATAAATACATACAAAGCCATCCATCTAGACCTAGAAGAATACCGGAATAGCAGCCGGGTTGA
GAAATTTCTGTTCGATACTAAGGAGGAGATTCTAATGCACCTCTGGAGGTACCCATCTCTTTCTATTCAT
GGGATCGAGGGCGCGTTTGATGAGCCTGGAACTAAAACAGTCATACCTGGCCGAGTTATAGGAAAATTTT
CAATCCGTCTAGTCCCTCACATGAATGTGTCTGCGGTGGAAAAACAGGTGACACGACATCTTGAAGATGT
GTTCTCCAAAAGAAATAGTTCCAACAAGATGGTTGTTTCCATGACTCTAGGACTACACCCGTGGATTGCA
AATATTGATGACACCCAGTATCTCGCAGCAAAAAGAGCGATCAGAACAGTGTTTGGAACAGAACCAGATA
TGATCCGGGATGGATCCACCATTCCAATTGCCAAAATGTTCCAGGAGATCGTCCACAAGAGCGTGGTGCT
AATTCCGCTGGGAGCTGTTGATGATGGAGAACATTCGCAGAATGAGAAAATCAACAGGTGGAACTACATA
GAGGGAACCAAATTATTTGCTGCCTTTTTCTTAGAGATGGCCCAGCTCCATTAA

Translation (507 aa):
MDPKLGRMAASLLAVLLLLLERGMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRF
RQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADR
GDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELV
EKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGILHEPMADLVALL
GSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSIH
GIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSMTLGLHPWIA
NIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYI
EGTKLFAAFFLEMAQLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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