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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS36138.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36138.1 |
Public |
Mus musculus |
11 |
Trim41 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 36138.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000047145.13 |
ENSMUSP00000037055.7 |
Accepted |
alive |
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NCBI |
NM_145377.2 |
NP_663352.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_663352.2 |
630 |
Q5NCC3 |
630 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 36138.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1893 nt): ATGGCTGCCGTTGCCATGACACCCAACCCTGTGCAGACCCTTCAGGAGGAGGCGGTGTGTGCCATCTGCC TCGATTACTTCACGGACCCGGTGTCCATCGGCTGCGGGCACAACTTCTGCCGAGTGTGTGTAACCCAGTT GTGGGGCGGGGAGGATGAGGAAGACAGAGATGAGTTGGATCGGGAGGAGGAGGAGGAGGAGGTCGGAGAG GAGGAAGAAGTGGAGGCTGTCGGGGCTGGCGGGGGCTGGGACACCCCTATGCGGGAAGAAGATTATGAGG GTGACATGGAGGAGGAGGCCGAGGAGGAAGAGGAAGTGTTCTGGAGTAGTGGTATAGGTGGGTCTAACTG GGACAACATGGACTATGTGTGGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAACTGGACTATTACTTGGGG GATGTGGCGGACCTGAGAGGGGAAGATGAGGACGAGGAGGAGGAAGTGCTGGAGGAAGACGAGGAAGAGG AGCTAGACCCGATCACCCAACTGCCGCCACCTCCAGCCCCTCGGAGATGCTTCACTTGTCCCCAGTGTCG AAAAAGTTTTCCTCGGCGGAGCTTCCGCCCCAACCTGCAGTTGGCCAACATGGTCCAGGTGATCCGTCAG ATGCACCCAACTCCTGGGCGAGGGAGCCGTGTGAATGAACAAGGCATCTGTCCGAGACATCAAGAAGCCC TGAAGCTGTTCTGTGAGGTGGATGAAGAAGCCATCTGTGTGGTGTGCCGCGAATCCAGGAGCCACAAACA GCATAGTGTGGTGCCATTGGAGGAGGTAGTGCAGGAGTACAAGGCCAAGCTACAAGGGCATGTGGAACCA CTTAGGAAGCATCTAGAGGCTGTGCAGAAGATGAAGGCCAAGGAGGAGAGGCGGGTGACAGAGCTGAAGA GCCAGATGAAGTCAGAGCTGGCAGCTGTGGCCTCAGAGTTTGGGCGGCTAACAAGGTTTCTGGCTGAAGA GCAGGCAGGATTAGAGAGGCGCCTCCGGGAGATGCACGAAGCTCAGTTAGGACGTGCGGGAGCAGCAGCC AACCGCCTTGAAGAGCAGGCTGCCCAGCTGAGCCGCTTGCTTGCTGAAGCCCAAGAACGGAGCCAACAGG GGGGCCTGCGGCTACTGCAAGACATCAAGGAGACTTTCAATAGGTGTGAAGAGATACAGTTGCAGCCCCC AGAGATTTGGTCCCCTGACCCATGCCAACCCCATAGCCACGACTTCCTGACAGACGCCATCGTGAGGAAA ATGAGCCGCATGTTTTGTCAGGCTGCAAGAGTGGACCTGACACTGGACCCTGACACAGCTCACCCAGCTC TGCTGCTGTCCCCTGATCGCCGTGGAGTCCGCTTGGCAGAACGTCGGCAGGAGGTTCCTGAACATTCCAA GCGCTTCTCAGCTGACTGCTGTGTACTAGGGGCCCAGGGCTTCCGCTCTGGCCGGCACTACTGGGAGGTA GAGGTGGGTGGGAGGCGAGGCTGGGCAGTGGGTGCTGCCCGTGAATCAACCCATCATAAAGAAAAAGTGG GCTCTGGGGGGTCCTCTGTTAGCAGTGGGGATGCCAGCTCCTCACGCCATCATCATCGCCGCCGCCGGCT CCATCTGCCTCAGCAGCTCCTACTCCAGCGCGAAGTGTGGTGTGTGGGCACCCACGGCAAACGATACCAG GCACAGAGCTCAACAGAGCAGACACTGCTCAGCCCATGTGAGAAACCACGGCGCTTTGGCGTATACCTGG ACTATGAGGCTGGGCGCCTAGGCTTCTACAATGCGGATACCTTAGCCCATGTGCACACCTTCTCAGCTGC CTTCCTTGGCGAGCGTGTTTTCCCTTTTTTCCGGGTACTTTCCAAGGGTACCCGAATCAAGCTCTGCCCT TGA
Translation (630 aa): MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREEEEEEVGE EEEVEAVGAGGGWDTPMREEDYEGDMEEEAEEEEEVFWSSGIGGSNWDNMDYVWEEEEEEEEEELDYYLG DVADLRGEDEDEEEEVLEEDEEEELDPITQLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQ MHPTPGRGSRVNEQGICPRHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEP LRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA NRLEEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEIQLQPPEIWSPDPCQPHSHDFLTDAIVRK MSRMFCQAARVDLTLDPDTAHPALLLSPDRRGVRLAERRQEVPEHSKRFSADCCVLGAQGFRSGRHYWEV EVGGRRGWAVGAARESTHHKEKVGSGGSSVSSGDASSSRHHHRRRRLHLPQQLLLQREVWCVGTHGKRYQ AQSSTEQTLLSPCEKPRRFGVYLDYEAGRLGFYNADTLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP
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