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Report for CCDS9283.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9283.1 Public Homo sapiens 12 ZNF10 24 110 108 CCDS HistoryNCBI Gene:7556Re-query CCDS DB by CCDS ID:9283.1Re-query CCDS DB by GeneID:7556See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9283.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248211.11 ENSP00000248211.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000248211.11Link to Ensembl Protein Viewer:ENSP00000248211.6Re-query CCDS DB by Nucleotide ID:ENST00000248211Re-query CCDS DB by Protein ID:ENSP00000248211
Original member Current member EBI ENST00000426665.6 ENSP00000393814.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426665.6Link to Ensembl Protein Viewer:ENSP00000393814.2Re-query CCDS DB by Nucleotide ID:ENST00000426665Re-query CCDS DB by Protein ID:ENSP00000393814
Original member Current member NCBI NM_015394.5 NP_056209.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015394.5Link to Protein Sequence:NP_056209.2Re-query CCDS DB by Nucleotide ID:NM_015394Re-query CCDS DB by Protein ID:NP_056209Link to BLAST:NP_056209.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056209.2 573 P21506 573 100% 0 0

Chromosomal Locations for CCDS 9283.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 133144493 133144525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133151028 133151154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133151809 133151904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133155503 133156968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1722 nt):
ATGGATGCTAAGTCACTAACTGCCTGGTCCCGGACACTGGTGACCTTCAAGGATGTATTTGTGGACTTCA
CCAGGGAGGAGTGGAAGCTGCTGGACACTGCTCAGCAGATCGTGTACAGAAATGTGATGCTGGAGAACTA
TAAGAACCTGGTTTCCTTGGGTTATCAGCTTACTAAGCCAGATGTGATCCTCCGGTTGGAGAAGGGAGAA
GAGCCCTGGCTGGTGGAGAGAGAAATTCACCAAGAGACCCATCCTGATTCAGAGACTGCATTTGAAATCA
AATCATCAGTTTCCAGCAGGAGCATTTTTAAAGATAAGCAATCCTGTGACATTAAAATGGAAGGAATGGC
AAGGAATGATCTCTGGTATTTGTCATTAGAAGAAGTCTGGAAATGTAGAGACCAGTTAGACAAGTATCAG
GAAAACCCAGAGAGACATTTGAGGCAAGTGGCATTCACCCAAAAGAAAGTACTTACTCAGGAGAGAGTCT
CTGAAAGTGGTAAATATGGGGGAAACTGTCTTCTTCCTGCTCAGCTAGTACTGAGAGAGTATTTCCATAA
ACGTGACTCACATACTAAAAGTTTAAAACATGATTTAGTTCTTAATGGTCATCAGGACAGTTGTGCAAGT
AACAGTAATGAATGTGGTCAAACTTTCTGTCAAAACATTCACCTTATTCAGTTTGCAAGAACTCACACAG
GTGATAAATCCTACAAATGCCCTGATAATGACAACTCTCTTACTCATGGTTCATCTCTTGGTATATCAAA
GGGCATACATAGAGAGAAACCCTATGAATGTAAGGAATGTGGAAAATTCTTCAGCTGGCGCTCTAATCTT
ACTAGGCATCAGCTTATTCATACTGGAGAAAAACCCTATGAGTGTAAAGAATGTGGAAAGTCTTTCAGCC
GGAGTTCTCACCTCATTGGACATCAAAAGACCCATACTGGTGAGGAACCCTATGAATGTAAAGAATGTGG
AAAATCCTTCAGCTGGTTCTCTCACCTTGTTACTCATCAGAGAACTCATACAGGAGACAAACTGTACACA
TGTAATCAGTGTGGGAAATCTTTTGTTCATAGCTCTAGGCTTATTAGACACCAGAGGACACATACTGGAG
AGAAACCCTATGAATGTCCTGAATGTGGGAAATCTTTCAGACAGAGCACACATCTCATTCTGCATCAGAG
AACCCATGTGAGAGTGAGGCCCTATGAATGCAATGAATGTGGAAAGTCTTACAGCCAGAGATCTCACCTT
GTTGTGCATCATAGAATTCACACTGGACTAAAACCTTTTGAGTGTAAGGATTGTGGAAAATGTTTTAGTC
GAAGCTCTCACCTTTATTCACATCAAAGAACCCACACTGGAGAGAAACCATATGAGTGTCATGATTGTGG
AAAATCTTTCAGCCAGAGTTCTGCCCTTATTGTGCATCAGAGGATACACACTGGAGAGAAACCATATGAA
TGCTGTCAGTGTGGGAAAGCCTTCATCCGGAAGAATGACCTCATTAAGCACCAGAGAATTCATGTTGGAG
AAGAGACCTATAAATGTAATCAATGTGGCATTATCTTCAGCCAGAACTCTCCATTTATAGTTCATCAAAT
AGCTCACACTGGAGAGCAGTTCTTAACATGCAATCAATGTGGGACAGCGCTTGTTAATACCTCTAACCTT
ATTGGATACCAGACAAATCATATTAGAGAAAATGCTTACTAA

Translation (573 aa):
MDAKSLTAWSRTLVTFKDVFVDFTREEWKLLDTAQQIVYRNVMLENYKNLVSLGYQLTKPDVILRLEKGE
EPWLVEREIHQETHPDSETAFEIKSSVSSRSIFKDKQSCDIKMEGMARNDLWYLSLEEVWKCRDQLDKYQ
ENPERHLRQVAFTQKKVLTQERVSESGKYGGNCLLPAQLVLREYFHKRDSHTKSLKHDLVLNGHQDSCAS
NSNECGQTFCQNIHLIQFARTHTGDKSYKCPDNDNSLTHGSSLGISKGIHREKPYECKECGKFFSWRSNL
TRHQLIHTGEKPYECKECGKSFSRSSHLIGHQKTHTGEEPYECKECGKSFSWFSHLVTHQRTHTGDKLYT
CNQCGKSFVHSSRLIRHQRTHTGEKPYECPECGKSFRQSTHLILHQRTHVRVRPYECNECGKSYSQRSHL
VVHHRIHTGLKPFECKDCGKCFSRSSHLYSHQRTHTGEKPYECHDCGKSFSQSSALIVHQRIHTGEKPYE
CCQCGKAFIRKNDLIKHQRIHVGEETYKCNQCGIIFSQNSPFIVHQIAHTGEQFLTCNQCGTALVNTSNL
IGYQTNHIRENAY


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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