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Report for CCDS27270.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27270.1 Public Mus musculus 14 Nudt15 23 108 98 CCDS HistoryNCBI Gene:214254Re-query CCDS DB by CCDS ID:27270.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27270.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043813.2 ENSMUSP00000039537.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043813.2Link to Ensembl Protein Viewer:ENSMUSP00000039537.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000043813Re-query CCDS DB by Protein ID:ENSMUSP00000039537
Original member Current member NCBI NM_001360484.1 NP_001347413.1 Accepted alive Link to Nucleotide Sequence:NM_001360484.1Link to Protein Sequence:NP_001347413.1Re-query CCDS DB by Nucleotide ID:NM_001360484Re-query CCDS DB by Protein ID:NP_001347413Link to BLAST:NP_001347413.1
Original member Current member NCBI NM_172527.3 NP_766115.1 Accepted alive Link to Nucleotide Sequence:NM_172527.3Link to Protein Sequence:NP_766115.1Re-query CCDS DB by Nucleotide ID:NM_172527Re-query CCDS DB by Protein ID:NP_766115Link to BLAST:NP_766115.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001347413.1 170 Q8BG93 170 100% 0 0
NP_766115.1 170 Q8BG93 170 100% 0 0

Chromosomal Locations for CCDS 27270.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 73521514 73521674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73523298 73523494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73525060 73525214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGGCCGCTAACGCAGAGCCGAGGCGGCGGCCAGGAGTTGGGGTCGGCGTGGTGGTGCTGAGCTGCGAGC
ATCCTCGCTGCGTCCTTCTGGGGAAAAGGAAAGGATCGTTTGGAGCCGGCAGTTTCCAGCTTCCTGGGGG
CCATTTGGAATTCGGTGAGACCTGGGAAGAATGCGCTCAGAGAGAAACCTGGGAAGAAGCTGGGCTTCAC
CTGAAAAATGTGTGCTTTGCCTCCGTGGTAAATTCTTTTGTTGAGAAGGAGAATTACCATTATGTTACCA
TATTAATGAAAGGAGAGGTGGATATGACTCATGATTCGGAGCCGAGGAATATGGAGCCTGAAAAGAATGA
AAGTTGGGAGTGGGTTCCATGGGAAGAATTCCCTCCCTTAGACCAGCTTTTCTGGGCTCTCCGCTGTCTA
AAAGAGCAAGGTTATGACCCATTTAAAGAGGACCTGAACCACCTGGAAGGGTACCGAGGAGAGCACCTTG
AAAGGACCACGAAGACTCCTTGA

Translation (170 aa):
MAANAEPRRRPGVGVGVVVLSCEHPRCVLLGKRKGSFGAGSFQLPGGHLEFGETWEECAQRETWEEAGLH
LKNVCFASVVNSFVEKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWEEFPPLDQLFWALRCL
KEQGYDPFKEDLNHLEGYRGEHLERTTKTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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