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Report for CCDS18691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18691.1 Public Mus musculus 4 Zbtb8b 23 108 98 CCDS HistoryNCBI Gene:215627Re-query CCDS DB by CCDS ID:18691.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 18691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053042.5 ENSMUSP00000058157.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053042.5Link to Ensembl Protein Viewer:ENSMUSP00000058157.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000053042Re-query CCDS DB by Protein ID:ENSMUSP00000058157
Original member NCBI NM_153541.3 NP_705769.2 Updated not alive Link to Nucleotide Sequence:NM_153541.3Link to Protein Sequence:NP_705769.2Re-query CCDS DB by Nucleotide ID:NM_153541Re-query CCDS DB by Protein ID:NP_705769
Current member NCBI NM_153541.4 NP_705769.2 Accepted alive Link to Nucleotide Sequence:NM_153541.4Link to Protein Sequence:NP_705769.2Re-query CCDS DB by Nucleotide ID:NM_153541Re-query CCDS DB by Protein ID:NP_705769Link to BLAST:NP_705769.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705769.2 484 Q8CII0 484 99.7934% 0 1

Chromosomal Locations for CCDS 18691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 129427513 129427827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129428428 129428606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 129432311 129433271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGGAGGCACAGTCCTACTGCGCCAAGCTCTTGGGGGAGTTGAATGAGCAGCGGAAACGAGACTTTTTCT
GTGACTGCAGCATCATCGTGGAAGGGCGCATCTTCAAGGCCCACAGGAACATCCTATTCGCCAACAGTGG
CTACTTCCGCGCCCTACTCCTTCACTACATCCAGGACAGCGGGCGGCACAGCACAGCTTCGCTGGACATC
GTCACCTCCGACGCCTTCTCCACCATTCTAGACTTCCTCTACTCTGGGAAGTTGGATCTGTGTGGCGAGA
ATGTGATCGAAGTCATGTCAGCTGCCAGCTACCTGCAGATGAATGAGGTGGTCAACTTCTGTAAGACGTA
CATCAGGTCGTCCCTGGACATCTGCAGAAAGATGGAGAAGGAGGCCGCTGTGGCTGCCGCAATGGCGGCA
GCGGCAGCTGCGGCGGCGGCTGCAGCCCATCAGATAGACAGTGAAAGTCCAAGTTCAGGACTGGAGGGGA
CTTCCTGTGGCACCAAGAGCTTTGTCTCCTCCCCAGTAGATGGAGAAGGGAGTCTAGACTGTACAATATC
ATCTTGTGATGACTGCCATCCCTTGGAGCTGGTGGCGAAAGACAGCCAGGGCTCTGGGGTCTCCGACAAT
GACCTTTGTGTTGTGCCCAGACGGGTTGAACCTAAGGTGGAATTCGATGTTGCCAGGGTGGAGGTGGAGG
CTGACGAACAGCTACAGCAATATGCCGCCCCACTGGCCCATATGGAGGAAGGCCTGCCCAGTAACCAGGC
CTTGGATCTGACCTACAACAGCTACCACGTGAAGCAGTTCCTGGAGGCTCTCCTGCGCAATGGTGCTGTC
CAGAGCAAAGATGACTTGGATTGTCACTCTTCTCGTGGCTTGGAGGGAAGACTGGAAGGTCCAGGAGTGG
CCATGAGTTCCGTGATGGACGTTCAGAACGACTGGTATAGAGAGGACGCAGGTGACGTGCTGGTGGTTCC
TATCAAGCTGCACAGGTGTCCCTTCTGCCCTTACACCGCCAAGCAGAAAGGCATCCTCAAACGGCACATC
CGCTCCCACACTGGCGAACGGCCGTACCCCTGCGAGACCTGTGGCAAGAGGTTCACCCGGCAGGAGCACC
TTCGGAGTCACGCCCTGAGCGTCCACAGATCCAGCCGTCCAATTATCTGCAAAGGCTGTCGACGAACCTT
TACGAGCCACCTGTCCCAAGGACTGCGGCGCTTCGGGCTGTGTGACAGTTGCACCTGTGTCACAGACCCC
CAGGAGGAAGAGGACGACCTGATGCCTGTCAACCTTAGCCTGGTGGAGGCTTCATCTGAAAGCCACGAGA
AGAGTGACACAGATGACTGGCCCATCTACATAGAGTCTGGTGAGGAGAATGACCCAACCGCGGAGGATTC
TGACGACAAGCCACACATTCGGCCCAACTTACCAGCCCCAGAGACACTTACGTAG

Translation (484 aa):
MEAQSYCAKLLGELNEQRKRDFFCDCSIIVEGRIFKAHRNILFANSGYFRALLLHYIQDSGRHSTASLDI
VTSDAFSTILDFLYSGKLDLCGENVIEVMSAASYLQMNEVVNFCKTYIRSSLDICRKMEKEAAVAAAMAA
AAAAAAAAAHQIDSESPSSGLEGTSCGTKSFVSSPVDGEGSLDCTISSCDDCHPLELVAKDSQGSGVSDN
DLCVVPRRVEPKVEFDVARVEVEADEQLQQYAAPLAHMEEGLPSNQALDLTYNSYHVKQFLEALLRNGAV
QSKDDLDCHSSRGLEGRLEGPGVAMSSVMDVQNDWYREDAGDVLVVPIKLHRCPFCPYTAKQKGILKRHI
RSHTGERPYPCETCGKRFTRQEHLRSHALSVHRSSRPIICKGCRRTFTSHLSQGLRRFGLCDSCTCVTDP
QEEEDDLMPVNLSLVEASSESHEKSDTDDWPIYIESGEENDPTAEDSDDKPHIRPNLPAPETLT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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