NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS24716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24716.1 Public Mus musculus 11 Nmur2 23 108 98 CCDS HistoryNCBI Gene:216749Re-query CCDS DB by CCDS ID:24716.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24716.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037682.2 ENSMUSP00000044718.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037682.2Link to Ensembl Protein Viewer:ENSMUSP00000044718.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000037682Re-query CCDS DB by Protein ID:ENSMUSP00000044718
Original member Current member NCBI NM_153079.4 NP_694719.2 Accepted alive Link to Nucleotide Sequence:NM_153079.4Link to Protein Sequence:NP_694719.2Re-query CCDS DB by Nucleotide ID:NM_153079Re-query CCDS DB by Protein ID:NP_694719Link to BLAST:NP_694719.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694719.2 395 Q8BZ39 395 100% 0 0

Chromosomal Locations for CCDS 24716.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56026974 56027248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 56029505 56029630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 56032940 56033024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 56040182 56040883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGGGAAAACTTGAAAATGCTTCCTGGATCCACGATTCTCTCATGAAGTACTTGAACAGCACAGAGGAGT
ACTTGGCCTACCTGTGTGGACCCAAGCGCAGTGACCTATCCCTTCCAGTGTCTGTGGTCTATGCGCTGAT
CTTCGTGGTGGGGGTGATAGGCAATCTTCTGGTGTGCCTGGTGATTGCCCGACATCAAACTTTGAAGACA
CCCACCAACTACTATCTCTTCAGCTTGGCAGTCTCAGACTTGCTGGTCCTGCTCTTAGGTATGCCACTGG
AGGTCTACGAGTTGTGGCACAATTATCCCTTCCTGTTTGGGCCGGTGGGATGCTACTTCAAGACAGCCCT
TTTCGAGACTGTGTGCTTTGCCTCCATTCTCAGTGTCACCACGGTTAGCATTGAGCGCTACGTGGCCATT
GTCCATCCGTTCCGAGCCAAGCTGGAGAGCACACGGCGACGGGCCCTCAGGATCCTCAGCCTAGTCTGGA
GCTTCTCTGTGGTCTTTTCTTTGCCCAACACCAGCATCCATGGCATCAAGTTCCAGCAGTTTCCCAACGG
GTCCTCTGTGCCCGGCTCTGCCACCTGCACAGTCACCAAACCCATATGGGTGTATAACTTCATCATCCAA
GCTACCTCCTTCCTCTTCTACATCCTCCCGATGACCCTCATCAGCGTCCTCTACTATCTCATGGGGCTCA
GGCTGAAGAGAGATGAATCTCTTGAGGCAGACAAAGTGACTGTGAATATTCACAGACCCTCCAGAAAATC
AGTCACCAAGATGCTGTTTGTCTTGGTCCTCGTGTTTGCTATCTGTTGGACCCCTTTCCATGTGGACAGG
CTCTTCTTCAGCTTTGTGGACGAGTGGACTGAGTCCCTGGCTGCTGTGTTCAACCTCATCCACGTGGTAT
CAGGTGTCTTTTTCTATCTGAGCTCCGCTGTCAACCCCATTATATATAACCTCCTGTCTCGGCGCTTCCG
GGCGGCCTTTCGGAATGTTGTCTCTCCTTCCTGCAAATGGTGCCATCCCCAGCATCGCCCACAGGGGCCT
CCAGCCCAGAAGGTTATCTTCTTGACAGAATGCCACCTTGTGGAGCTGACAGAGGATGCGGGCCCCCAGT
TCCCTTGTCAGTCATCCATCCACAACACCCAACTTACCACCGTCCCCTGTGTTGAAGAGGTACCATGA

Translation (395 aa):
MGKLENASWIHDSLMKYLNSTEEYLAYLCGPKRSDLSLPVSVVYALIFVVGVIGNLLVCLVIARHQTLKT
PTNYYLFSLAVSDLLVLLLGMPLEVYELWHNYPFLFGPVGCYFKTALFETVCFASILSVTTVSIERYVAI
VHPFRAKLESTRRRALRILSLVWSFSVVFSLPNTSIHGIKFQQFPNGSSVPGSATCTVTKPIWVYNFIIQ
ATSFLFYILPMTLISVLYYLMGLRLKRDESLEADKVTVNIHRPSRKSVTKMLFVLVLVFAICWTPFHVDR
LFFSFVDEWTESLAAVFNLIHVVSGVFFYLSSAVNPIIYNLLSRRFRAAFRNVVSPSCKWCHPQHRPQGP
PAQKVIFLTECHLVELTEDAGPQFPCQSSIHNTQLTTVPCVEEVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH