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Report for CCDS50067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50067.1 Public Mus musculus 17 Zfp955b 23 108 98 CCDS HistoryNCBI Gene:100043468Re-query CCDS DB by CCDS ID:50067.1Re-query CCDS DB by GeneID:100043468See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50067.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099414.4 ENSMUSP00000097011.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099414.4Link to Ensembl Protein Viewer:ENSMUSP00000097011.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000099414Re-query CCDS DB by Protein ID:ENSMUSP00000097011
Original member Current member NCBI NM_001142957.1 NP_001136429.1 Accepted alive Link to Nucleotide Sequence:NM_001142957.1Link to Protein Sequence:NP_001136429.1Re-query CCDS DB by Nucleotide ID:NM_001142957Re-query CCDS DB by Protein ID:NP_001136429Link to BLAST:NP_001136429.1

Chromosomal Locations for CCDS 50067.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 33289649 33289669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33300581 33300707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33300945 33301002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33301765 33303196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1638 nt):
ATGCATCGGAAGCAGAAGATGGGTCCAGTGACTTTTGAGGACGTGGCTGTGAACTTCAGTCTAGGAGAAT
GGGCTCTGCTGGATTCTTACCAAAAGAAGCTCTACAGAGATGTGATGATGGAAACCTTCATGAACCTGAT
CTCCATAGGGAAGACAGAGGAAGAAAGTATGGATGTGAACTACCCACAGCTCCAGAGAAACTTGAGAATT
CAGGTGGTTGAGAAATTCTGTGACTATGAACATAGCAGTCAGTGTGGAAAGACTCACCAACAGATGACAG
AGCATATTGTTAATGGGGAGAGTCATCCTGCAGTCACGGTTTATGAAAGCAGTGTGAATGTAAAAGACAT
CAATGGTCACTCATCCTCAGATGTGCTCCTTAGAGGTCAAAATGAAGAGAAACCATACAGATGTCAGGAA
CTCGTGGAAAAAGCTATCAAACGTGAAAAATGTTGGAAAGACGTCACCTATTCTGAATCCTTCCATACAC
TTGAGAGTGTTCCTGCCACAGAGAACAGTTGTGAAAATACACAGACCTATGAATCTTACAGGACTCTTAC
GCCTCATCAAGATTCTAAGAGAGCCCACACTGGAGATGAGCTACATGAGTGTAAACAATTTGAGAAAACC
TTAAAGGGAGAAAGTGATATTCAAATATATGAAAGGATCCATACTGGAGAAAAACCACTTGAGTATAAGC
AATGTGGAGAAGCCTTTGTTAATTCCAGTCACCAGACCAAACATCAGAGAATTCACACAAGAGAAAAAAC
ATACTCATGTAGACACTGTGGTGAAACTTTCCTGTATTCCATGGCCCGTCGTAATCATGAAAAAACTCAC
AAAAGAGATCACACAAGAGAAAAAACATACTCATGTAGACACTGTGGTGAAACTTTCCTGTATTCCATGG
CCTGTCATAATCATGAAAAAACTCACAAAAGAGAATGGAGTTTCATATGTAAGTATTGTGGGAAAGCATG
CATTCATTCTTATCAACTTCTTCAGCATGAAAGAAGCCATACTCGAGAGAAACGGTATACATGTGCTCAG
TGTGGCAAAGCGTTTAGACGGTCCTCAAACCTTCACAAACATGAAAGAATTCACAGTGAAAGGAAACTTT
ATGCATGTAAACATTGTGGGAAGGCCTTTATCAGTGAGGGCAACTGTTCCAACCATGAACGAATTCATAC
TGCAGGAAAAACCTACGTTTGCAAGCAGTGTGGGAAAGGGTTTACATGTTCCTCATACCTTCAAAAGCAT
GAAAGACGCCATACTCAAGAGAAACAGTATACATGTGCTCAGTGTGGCAAAGCGTTTAGACGGTCCTCAA
ACCTTCACAAACATGAAAGAATTCACAGTGAAAAGAAACTTTATGCATGTAAACATTGTGGGAAGGCCTT
TAGCAGTGCGGGCAACCGTTACAACCATGAACAAATTCATAATGCAGAAAAAACCTACATTTGCAAGCAG
TGTGGGAAAGGGTTTACACTTTCCTCTTACCTTCGAAAGCATAAAAGAATTCACACTGGAGAGAAGCCCT
ATACATGTAAATATTGTGGGAAAGCCTTCACCCATTCGGGTGCTCATCACAAGCATGAAAAAATTCACAC
TAGAGAGAAACCATATGTGTGTGTATAG

Translation (545 aa):
MHRKQKMGPVTFEDVAVNFSLGEWALLDSYQKKLYRDVMMETFMNLISIGKTEEESMDVNYPQLQRNLRI
QVVEKFCDYEHSSQCGKTHQQMTEHIVNGESHPAVTVYESSVNVKDINGHSSSDVLLRGQNEEKPYRCQE
LVEKAIKREKCWKDVTYSESFHTLESVPATENSCENTQTYESYRTLTPHQDSKRAHTGDELHECKQFEKT
LKGESDIQIYERIHTGEKPLEYKQCGEAFVNSSHQTKHQRIHTREKTYSCRHCGETFLYSMARRNHEKTH
KRDHTREKTYSCRHCGETFLYSMACHNHEKTHKREWSFICKYCGKACIHSYQLLQHERSHTREKRYTCAQ
CGKAFRRSSNLHKHERIHSERKLYACKHCGKAFISEGNCSNHERIHTAGKTYVCKQCGKGFTCSSYLQKH
ERRHTQEKQYTCAQCGKAFRRSSNLHKHERIHSEKKLYACKHCGKAFSSAGNRYNHEQIHNAEKTYICKQ
CGKGFTLSSYLRKHKRIHTGEKPYTCKYCGKAFTHSGAHHKHEKIHTREKPYVCV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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