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Report for CCDS45884.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45884.1 Public Homo sapiens 18 FBXO15 24 110 108 CCDS HistoryNCBI Gene:201456Re-query CCDS DB by CCDS ID:45884.1Re-query CCDS DB by GeneID:201456See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45884.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000419743.7 ENSP00000393154.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000419743.7Link to Ensembl Protein Viewer:ENSP00000393154.2Re-query CCDS DB by Nucleotide ID:ENST00000419743Re-query CCDS DB by Protein ID:ENSP00000393154
Original member Current member NCBI NM_001142958.2 NP_001136430.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001142958.2Link to Protein Sequence:NP_001136430.1Re-query CCDS DB by Nucleotide ID:NM_001142958Re-query CCDS DB by Protein ID:NP_001136430Link to BLAST:NP_001136430.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136430.1 510 Q8NCQ5-1 510 100% 0 0

Chromosomal Locations for CCDS 45884.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 74073461 74073730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74081927 74082051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74123368 74123510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74124489 74124571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74125975 74126101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74129405 74129614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74130416 74130658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74135762 74135866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74140202 74140312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74147670 74147785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1533 nt):
ATGGCGACTGGACGCGGTCGGATCTTGCAGCAGCACTGGCTCGGCCTCCAGACGCTGCGCGGGCCCAGCA
GGGGCGGTGGCGCGGCCCGGGGGCGCGCCAGGGCCTTTGGGTGCAGAAAGGGGCCAGGGGTCAAGCTTTC
TGCAGGCTCTGCTGCCCTGAGGTGCCATGCCGGAGGTGGACAGCACTGGGAGAGCTCTTTCTCCTGCTGT
TCTGGGTTCCTGGATGGAATGCCTTCAGAAATCTTGCTGAAGATATTTTCCTACTTGGATGCTGTGAGCC
TTCTGTGTACTGGATGTGTGAGCAGGCGCTTTTATCATCTAGCCAATGACAATTTTATTTGGATCGGAAT
CTACTCAACTGCTTTTTCACCTGCAAGATCAAATTGGAAATTTAATTCAGTAGAGAAGATAGCTATGTCT
ATGAGCTTTCTGTCAGTTCAGGATAAAGAAGCTGGTTATTGGAAGAAAGAATATATCACAAAACAAATAG
CATCTGTAAAAGCCGCACTAGCTGACATTCTCAAACCTGTCAACCCTTACACAGGCCTTCCAGTTAAGAC
CAAAGAGGCCCTCAGAATATTTGGTTTAGGTTGGGCAATTATACTGAAAGAAAAAGGTGGAAAAGAATAT
ATCATGGAGCATGTTGATCTTTCCATAAATGACACATCAGTTACTGTTATATGGTATGGCAAAAAATGGC
CATGCCTAGCATCATTGTCAACCTTAGATTTATGTGGCATGACACCAGTTTTTACCGACTGGTATAAAAC
TCCCACCAAACATAGACTCCGATGGCATTCTTTAATTGCAAAGTACAATCTGAGTCATTTGACCATATCT
ACCATGATTGGCTGTGACAGACTCATTCGGATCTTCTGCCTGCACCCTGGCCTCCTGGTGGGAGTGTGGA
AGAAGGAGGAAGAACTGGCTTTTGTTATGGCAAATCTTCATTTTCATCACCTTGTGGAGAGGAGCACATT
AGGCTCGGCTACTATCCCCTATGAACTGCCTCCACATAGCCCCTTTTTGGATGATAGCCCCGAGTATGGA
CTGCACGGCTACCAACTCCATGTTGATCTGCACAGCGGTGGGGTTTTCTACCTATGTGGTACATTTCGCA
ATCTCTTCACCAAGAGAGGAAATATTGAAAATGGACATGTGAAGCTCATTGTTATACATTTAAAAAATAA
CAGAGAACACCTACCTCTTATTGGAAAAGTTGGCCTCTCGTGGAAAACTGATATTTTTGATGGCTGTATA
AAGAGTTGTTCCATGATGGACGTAACTCTTTTGGATGAACATGGGAAACCCTTTTGGTGTTTCAGTTCCC
CGGTGTGCCTGAGATCGCCTGCCACACCCTCTGACAGCTCTAGCTTCTTGGGACAGACATACAACGTGGA
CTACGTTGATGCGGAAGGAAGAGTGCACGTGGAGCTGGTGTGGATCAGAGAGACCGAAGAATACCTTATT
GTCAACCTGGTCCTTTATCTTAGTATCGCAAAAATCAACCATTGGTTTGGGACTGAATATTAG

Translation (510 aa):
MATGRGRILQQHWLGLQTLRGPSRGGGAARGRARAFGCRKGPGVKLSAGSAALRCHAGGGQHWESSFSCC
SGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFSPARSNWKFNSVEKIAMS
MSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPYTGLPVKTKEALRIFGLGWAIILKEKGGKEY
IMEHVDLSINDTSVTVIWYGKKWPCLASLSTLDLCGMTPVFTDWYKTPTKHRLRWHSLIAKYNLSHLTIS
TMIGCDRLIRIFCLHPGLLVGVWKKEEELAFVMANLHFHHLVERSTLGSATIPYELPPHSPFLDDSPEYG
LHGYQLHVDLHSGGVFYLCGTFRNLFTKRGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDIFDGCI
KSCSMMDVTLLDEHGKPFWCFSSPVCLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELVWIRETEEYLI
VNLVLYLSIAKINHWFGTEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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