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Report for CCDS52486.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52486.1 Public Mus musculus 8 Tmem255b 23 108 98 CCDS HistoryNCBI Gene:272465Re-query CCDS DB by CCDS ID:52486.1Re-query CCDS DB by GeneID:272465See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52486.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000167505.2 ENSMUSP00000130504.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167505.2Link to Ensembl Protein Viewer:ENSMUSP00000130504.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000167505Re-query CCDS DB by Protein ID:ENSMUSP00000130504
Original member Current member NCBI NM_001143671.1 NP_001137143.1 Accepted alive Link to Nucleotide Sequence:NM_001143671.1Link to Protein Sequence:NP_001137143.1Re-query CCDS DB by Nucleotide ID:NM_001143671Re-query CCDS DB by Protein ID:NP_001137143Link to BLAST:NP_001137143.1

Chromosomal Locations for CCDS 52486.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 13435613 13435667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13441138 13441280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13443987 13444049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13451026 13451115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13454161 13454241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13455129 13455214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13455913 13456072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13456951 13457094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13461205 13461369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGCAGCCGCTCCCACCGCCCGTGCCAGGCCCTCTGGCTCTGCTGGACACCACAGAGGGCTTTGCCAGGA
GGAAGAAGATCTCTCTGTGGTTTGTGGGCTCTCTCCTGCTGGTGTCTACTCTCATCCTGACCATTGGCCT
TGCTGCAACCACCAGGACAGAGAATGTGACTGTGGGCGGCTACTACCCAGGGATTATTCTGGGCTTTGGG
TCCTTCCTGGGAATCATTGGTATTCACCTGGTGGAGAATAGAAGACAAATGTTGGTGGCAGCCATCGTGT
TCCTCAGCTTTGGGGTGGTGGCGGCGTTCTGCTGTGCCATAGTCGACAGCGTGTTCGCAGCGCGGCACAT
TGAGCCAAGGCCTCTCAGTGCGGGAAGATGCCAGTTTTACTCCAGTGGGGCTGGGTACTTGTATGACGTC
TATCAGACAGAGGTCACCTGCTACTCTTTGAATGGTCGATGCCAGTTGAAGGTGAGGAGCAACACGTGCT
ACTGCTGCGACCTCTACGCCTGTGGGAGCACTGAGCCCTCGCCTGCCTACTATGAGTTTGTGGGCGTGCG
TAGCTGCCAGGACGTGGTCCACCTGTACCGGCTGCTCTGGGTATCCACAGTGCTGAACGTATTGGGCCTG
TGCCTGGGCATTGTCACAGCTGCAGTCCTAGGGGCCTTCAAGGACATGGTCCCTCTGTCTCAGCTGGCCT
ATGGCCCGTCACCGCCACCTCAGATTCTCTATAACCCTGCACAGCAGATTCTCGCCTACACCGGCCTGTG
TCCTCCGTCTATGGGTGTGCCAACCTGTTCCTCCTACCCTCTGCCGCTACAGCCCTCCAGTGCCCCGCCA
GCCTCGGCCTCTGCTGACCTCTCTCTGCCTGAGGACACAGAGTCTCCCTCCCAGTGCCAGCCCAGCCGTG
GGTGTTCCCATGCTCCTTCACCCTGCACACCAGCCTACTTCCTCCCAGGGGAGAAGCCACCCCCCTACGC
ACCCTGA

Translation (328 aa):
MQPLPPPVPGPLALLDTTEGFARRKKISLWFVGSLLLVSTLILTIGLAATTRTENVTVGGYYPGIILGFG
SFLGIIGIHLVENRRQMLVAAIVFLSFGVVAAFCCAIVDSVFAARHIEPRPLSAGRCQFYSSGAGYLYDV
YQTEVTCYSLNGRCQLKVRSNTCYCCDLYACGSTEPSPAYYEFVGVRSCQDVVHLYRLLWVSTVLNVLGL
CLGIVTAAVLGAFKDMVPLSQLAYGPSPPPQILYNPAQQILAYTGLCPPSMGVPTCSSYPLPLQPSSAPP
ASASADLSLPEDTESPSQCQPSRGCSHAPSPCTPAYFLPGEKPPPYAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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