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Report for CCDS44411.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44411.1 Public Homo sapiens 10 REEP3 24 110 108 CCDS HistoryNCBI Gene:221035Re-query CCDS DB by CCDS ID:44411.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44411.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373758.5 ENSP00000362863.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373758.5Link to Ensembl Protein Viewer:ENSP00000362863.4Re-query CCDS DB by Nucleotide ID:ENST00000373758Re-query CCDS DB by Protein ID:ENSP00000362863
Original member Current member NCBI NM_001001330.3 NP_001001330.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001330.3Link to Protein Sequence:NP_001001330.1Re-query CCDS DB by Nucleotide ID:NM_001001330Re-query CCDS DB by Protein ID:NP_001001330Link to BLAST:NP_001001330.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001330.1 255 Q6NUK4-1 255 100% 0 0

Chromosomal Locations for CCDS 44411.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 63521546 63521577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63566338 63566410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63594778 63594854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63598024 63598144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63599170 63599283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63610187 63610334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63619655 63619800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63620813 63620869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGGTGTCCTGGATGATCTCCAGAGCCGTGGTGCTGGTGTTTGGAATGCTTTATCCTGCATATTATTCAT
ACAAAGCTGTGAAAACAAAAAACGTGAAGGAATATGTTCGATGGATGATGTACTGGATTGTTTTTGCTCT
CTATACTGTGATTGAAACAGTAGCCGATCAAACAGTTGCTTGGTTTCCCCTGTACTATGAGCTGAAGATT
GCTTTTGTCATATGGCTGCTTTCTCCCTATACCAAAGGAGCAAGTTTAATATATAGAAAATTCCTTCATC
CACTTCTTTCTTCAAAGGAAAGGGAGATTGATGATTATATTGTACAAGCAAAGGAACGAGGCTATGAAAC
CATGGTAAACTTTGGACGGCAAGGTTTAAACCTTGCAGCTACTGCTGCTGTTACTGCAGCAGTAAAGAGC
CAAGGAGCAATAACTGAACGTTTAAGAAGCTTCAGTATGCATGATTTAACAACTATCCAAGGTGATGAGC
CTGTGGGACAAAGACCATACCAACCTCTACCAGAAGCAAAAAAGAAAAGTAAACCAGCCCCCAGTGAATC
AGCAGGTTATGGAATTCCACTGAAAGACGGAGATGAGAAAACAGATGAAGAAGCAGAGGGGCCATATTCA
GATAATGAGATGTTAACACACAAAGGGCTTCGAAGATCGCAAAGCATGAAATCTGTGAAAACCACCAAAG
GCCGCAAAGAGGTGCGGTACGGGTCACTAAAATACAAAGTGAAGAAACGACCACAAGTGTATTTTTAG

Translation (255 aa):
MVSWMISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVAWFPLYYELKI
AFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVNFGRQGLNLAATAAVTAAVKS
QGAITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYS
DNEMLTHKGLRRSQSMKSVKTTKGRKEVRYGSLKYKVKKRPQVYF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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