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Report for CCDS21722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21722.1 Public Mus musculus 7 Or5p80 23 108 98 CCDS HistoryNCBI Gene:258769Re-query CCDS DB by CCDS ID:21722.1Re-query CCDS DB by GeneID:258769See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21722.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072914.2 ENSMUSP00000072686.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072914.2Link to Ensembl Protein Viewer:ENSMUSP00000072686.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000072914Re-query CCDS DB by Protein ID:ENSMUSP00000072686
Original member Current member NCBI NM_146773.1 NP_666984.1 Accepted alive Link to Nucleotide Sequence:NM_146773.1Link to Protein Sequence:NP_666984.1Re-query CCDS DB by Nucleotide ID:NM_146773Re-query CCDS DB by Protein ID:NP_666984Link to BLAST:NP_666984.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666984.1 310 Q8VG42 310 100% 0 0

Chromosomal Locations for CCDS 21722.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 108629994 108630926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGAACCTGGAAACTACACAGTGGTAACAGAGGTGATTCTTTTGGGATTTACAGAGGATGCTATAATCC
GTGCCATTTTATTTATTGTGTTTCTAATAATCTACTCTGTCACCTTAATGGGCAATGCGAGCATAATCAT
GCTAATCAGAAGAAGCCCTCAGCTTCACACCCCCATGTACCTTTTGCTCAGCCATTTGGCATTTGTAGAC
ATTGGGTACTCCTCATCAGTCACACCCATCATGCTGAAGGGCTTTCTCAGAAAAGAAACATTTATCCTTG
TGTCTGGCTGTGTGGCTCAACTCTGTTCTGTAGTGACATTTGGGTCAACTGAGTGCTTCCTGCTGGCTGC
CATGGCCTATGATCGCTATGTAGCCATCTGCTCCCCTCTGCTCTATGCCACGCAGATGTCCTCCACAGTC
TGTATTCTCCTAGTGGGAGCTTCCTACCTAGGTGGATGTGTGAATGCTTGGACATTTACTGGATGTTTAT
TAAACCTGTCCTTTTGTAGACCAAATAAAGTTAATCACTTTTTCTGTGACTATTCACCACTTTTGAAGAT
TTCGTGTTCTCATGACTTTTCTTCTGAAGTCATTCCAGCAATCTCTTCAGGGTCGATCATTGTGGTCACT
GTGTTTATTATTGCACTGTCTTATGTTTACATCCTTGTCTCAATCTTGAAGATGCGCTCCACTGAGGGTC
GCCAGAAGGCCTTCTCCACCTGCACCTCCCACCTCACTGCGGTCACTCTATTCTATGGGACCATCACATT
CATTTATGTGATGCCCAAATCCAGTTACTCCACAGACCAGAACAAGGTAGTGTCTGTATTCTACACAGTG
GTGATCCCAATGTTGAACCCCATCATCTATAGCCTCAGAAACAAGGATGTTAAAGAGGCCATGAAAAAAT
TGATGGCTAACACTCACCATTAA

Translation (310 aa):
MEPGNYTVVTEVILLGFTEDAIIRAILFIVFLIIYSVTLMGNASIIMLIRRSPQLHTPMYLLLSHLAFVD
IGYSSSVTPIMLKGFLRKETFILVSGCVAQLCSVVTFGSTECFLLAAMAYDRYVAICSPLLYATQMSSTV
CILLVGASYLGGCVNAWTFTGCLLNLSFCRPNKVNHFFCDYSPLLKISCSHDFSSEVIPAISSGSIIVVT
VFIIALSYVYILVSILKMRSTEGRQKAFSTCTSHLTAVTLFYGTITFIYVMPKSSYSTDQNKVVSVFYTV
VIPMLNPIIYSLRNKDVKEAMKKLMANTHH


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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